Gene : Potri.001G235400 P. trichocarpa v3.0
Defline:  (1 of 2) 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Genomic Order:  2354
Name:  ? Potri.001G235400 Secondary Identifier:  ? PAC:27044730
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5080 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7619 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7606 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6598 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7036 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6433 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7601 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7726 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G235400 0.5kb upstream 0.5kb upstream 6325 true Chr01: 24715397-24721721 Populus trichocarpa
Potri.001G235400 0.5kb upstream 0.5kb upstream 500 false Chr01: 24721222-24721721 Populus trichocarpa
Potri.001G235400 0.5kb downstream 0.5kb downstream 6325 true Chr01: 24714897-24721221 Populus trichocarpa
Potri.001G235400 0.5kb downstream 0.5kb downstream 500 false Chr01: 24714897-24715396 Populus trichocarpa
Potri.001G235400 1.0kb upstream 1.0kb upstream 6825 true Chr01: 24715397-24722221 Populus trichocarpa
Potri.001G235400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 24721222-24722221 Populus trichocarpa
Potri.001G235400 1.0kb downstream 1.0kb downstream 6825 true Chr01: 24714397-24721221 Populus trichocarpa
Potri.001G235400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 24714397-24715396 Populus trichocarpa
Potri.001G235400 2.0kb upstream 2.0kb upstream 7825 true Chr01: 24715397-24723221 Populus trichocarpa
Potri.001G235400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 24721222-24723221 Populus trichocarpa
Potri.001G235400 2.0kb downstream 2.0kb downstream 7825 true Chr01: 24713397-24721221 Populus trichocarpa
Potri.001G235400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 24713397-24715396 Populus trichocarpa
Potri.001G235400 5.0kb upstream 5.0kb upstream 10825 true Chr01: 24715397-24726221 Populus trichocarpa
Potri.001G235400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 24721222-24726221 Populus trichocarpa
Potri.001G235400 5.0kb downstream 5.0kb downstream 10825 true Chr01: 24710397-24721221 Populus trichocarpa
Potri.001G235400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 24710397-24715396 Populus trichocarpa
Potri.001G235400 10.0kb upstream 10.0kb upstream 15825 true Chr01: 24715397-24731221 Populus trichocarpa
Potri.001G235400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 24721222-24731221 Populus trichocarpa
Potri.001G235400 10.0kb downstream 10.0kb downstream 15825 true Chr01: 24705397-24721221 Populus trichocarpa
Potri.001G235400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 24705397-24715396 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.703        
cufflinks 0.194       Low
cufflinks 1.216       High
cufflinks 0.243       Low
cufflinks 0.177       Low
cufflinks 0.702        
cufflinks 0.624        
cufflinks 0.694        
cufflinks 0.231       Low
cufflinks 0.933       High
cufflinks 0.464        
cufflinks 0.404        
cufflinks 0.702        
cufflinks 0.548        
cufflinks 0.114     Low Low
cufflinks 0.17       Low
cufflinks 0.328        
cufflinks 0.785        
cufflinks 0.732        
cufflinks 0.353        
cufflinks 0.782        
cufflinks 0.566        
cufflinks 0.632        
cufflinks 0.83        
cufflinks 0.856        
cufflinks 0.523        
cufflinks 1.095        
cufflinks 1.003        
cufflinks 1.974       High
cufflinks 0.763        

0 Strain