Gene : Potri.001G368500 P. trichocarpa v3.0
Defline:  (1 of 1) K03500 - 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] (rsmB, sun) Genomic Order:  3685
Name:  ? Potri.001G368500 Secondary Identifier:  ? PAC:27044242
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G368500 0.5kb upstream 0.5kb upstream 8216 true Chr01: 38179930-38188145 Populus trichocarpa
Potri.001G368500 0.5kb upstream 0.5kb upstream 500 false Chr01: 38187646-38188145 Populus trichocarpa
Potri.001G368500 0.5kb downstream 0.5kb downstream 8216 true Chr01: 38179430-38187645 Populus trichocarpa
Potri.001G368500 0.5kb downstream 0.5kb downstream 500 false Chr01: 38179430-38179929 Populus trichocarpa
Potri.001G368500 1.0kb upstream 1.0kb upstream 8716 true Chr01: 38179930-38188645 Populus trichocarpa
Potri.001G368500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38187646-38188645 Populus trichocarpa
Potri.001G368500 1.0kb downstream 1.0kb downstream 8716 true Chr01: 38178930-38187645 Populus trichocarpa
Potri.001G368500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38178930-38179929 Populus trichocarpa
Potri.001G368500 2.0kb upstream 2.0kb upstream 9716 true Chr01: 38179930-38189645 Populus trichocarpa
Potri.001G368500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38187646-38189645 Populus trichocarpa
Potri.001G368500 2.0kb downstream 2.0kb downstream 9716 true Chr01: 38177930-38187645 Populus trichocarpa
Potri.001G368500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38177930-38179929 Populus trichocarpa
Potri.001G368500 5.0kb upstream 5.0kb upstream 12716 true Chr01: 38179930-38192645 Populus trichocarpa
Potri.001G368500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38187646-38192645 Populus trichocarpa
Potri.001G368500 5.0kb downstream 5.0kb downstream 12716 true Chr01: 38174930-38187645 Populus trichocarpa
Potri.001G368500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38174930-38179929 Populus trichocarpa
Potri.001G368500 10.0kb upstream 10.0kb upstream 17716 true Chr01: 38179930-38197645 Populus trichocarpa
Potri.001G368500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38187646-38197645 Populus trichocarpa
Potri.001G368500 10.0kb downstream 10.0kb downstream 17716 true Chr01: 38169930-38187645 Populus trichocarpa
Potri.001G368500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38169930-38179929 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.089       High
cufflinks 0.732        
cufflinks 0.478       Low
cufflinks 1.584        
cufflinks 0.869        
cufflinks 0.816        
cufflinks 1.082        
cufflinks 0.959        
cufflinks 0.76        
cufflinks 0.984        
cufflinks 0.437       Low
cufflinks 1.257        
cufflinks 1.166        
cufflinks 3.151       High
cufflinks 1.01        
cufflinks 1.765       High
cufflinks 0.24       Low
cufflinks 0.712        
cufflinks 1.199        
cufflinks 0.789        
cufflinks 1.694        
cufflinks 0.879        
cufflinks 1.529        
cufflinks 0.983        
cufflinks 14.373        
cufflinks 14.69        
cufflinks 12.994        
cufflinks 13.329        
cufflinks 13.707        
cufflinks 14.858       High

0 Strain