Gene : Potri.001G067900 P. trichocarpa v3.0
Defline:  (1 of 2) K00411 - ubiquinol-cytochrome c reductase iron-sulfur subunit (UQCRFS1, RIP1, petA) Genomic Order:  679
Name:  ? Potri.001G067900 Secondary Identifier:  ? PAC:27043372
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-3781 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7279 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G067900 0.5kb upstream 0.5kb upstream 2985 true Chr01: 5410904-5413888 Populus trichocarpa
Potri.001G067900 0.5kb upstream 0.5kb upstream 500 false Chr01: 5410904-5411403 Populus trichocarpa
Potri.001G067900 0.5kb downstream 0.5kb downstream 2985 true Chr01: 5411404-5414388 Populus trichocarpa
Potri.001G067900 0.5kb downstream 0.5kb downstream 500 false Chr01: 5413889-5414388 Populus trichocarpa
Potri.001G067900 1.0kb upstream 1.0kb upstream 3485 true Chr01: 5410404-5413888 Populus trichocarpa
Potri.001G067900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5410404-5411403 Populus trichocarpa
Potri.001G067900 1.0kb downstream 1.0kb downstream 3485 true Chr01: 5411404-5414888 Populus trichocarpa
Potri.001G067900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5413889-5414888 Populus trichocarpa
Potri.001G067900 2.0kb upstream 2.0kb upstream 4485 true Chr01: 5409404-5413888 Populus trichocarpa
Potri.001G067900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5409404-5411403 Populus trichocarpa
Potri.001G067900 2.0kb downstream 2.0kb downstream 4485 true Chr01: 5411404-5415888 Populus trichocarpa
Potri.001G067900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5413889-5415888 Populus trichocarpa
Potri.001G067900 5.0kb upstream 5.0kb upstream 7485 true Chr01: 5406404-5413888 Populus trichocarpa
Potri.001G067900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5406404-5411403 Populus trichocarpa
Potri.001G067900 5.0kb downstream 5.0kb downstream 7485 true Chr01: 5411404-5418888 Populus trichocarpa
Potri.001G067900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5413889-5418888 Populus trichocarpa
Potri.001G067900 10.0kb upstream 10.0kb upstream 12485 true Chr01: 5401404-5413888 Populus trichocarpa
Potri.001G067900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5401404-5411403 Populus trichocarpa
Potri.001G067900 10.0kb downstream 10.0kb downstream 12485 true Chr01: 5411404-5423888 Populus trichocarpa
Potri.001G067900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5413889-5423888 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.712     High Low
cufflinks 26.075     High  
cufflinks 22.909     High  
cufflinks 23.54     High  
cufflinks 27.885     High  
cufflinks 30.18     High High
cufflinks 29.863     High High
cufflinks 29.676     High High
cufflinks 22.59     High Low
cufflinks 29.582     High High
cufflinks 29.837     High High
cufflinks 22.815     High  
cufflinks 30.47     High High
cufflinks 21.393     High Low
cufflinks 22.163     High Low
cufflinks 31.771     High High
cufflinks 22.824     High  
cufflinks 26.466     High  
cufflinks 23.705     High  
cufflinks 24.339     High  
cufflinks 21.915     High Low
cufflinks 29.463     High  
cufflinks 28.796     High  
cufflinks 25.707     High  
cufflinks 108.905     High  
cufflinks 91.276     High  
cufflinks 92.943     High  
cufflinks 125.126     High  
cufflinks 126.844     High  
cufflinks 86.531     High Low

0 Strain