Gene : Potri.001G458600 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR21043//PTHR21043:SF1 - IOJAP SUPERFAMILY ORTHOLOG // PROTEIN IOJAP, CHLOROPLASTIC Genomic Order:  4585
Name:  ? Potri.001G458600 Secondary Identifier:  ? PAC:27043456
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G458600 0.5kb upstream 0.5kb upstream 4477 true Chr01: 49213774-49218250 Populus trichocarpa
Potri.001G458600 0.5kb upstream 0.5kb upstream 500 false Chr01: 49217751-49218250 Populus trichocarpa
Potri.001G458600 0.5kb downstream 0.5kb downstream 4477 true Chr01: 49213274-49217750 Populus trichocarpa
Potri.001G458600 0.5kb downstream 0.5kb downstream 500 false Chr01: 49213274-49213773 Populus trichocarpa
Potri.001G458600 1.0kb upstream 1.0kb upstream 4977 true Chr01: 49213774-49218750 Populus trichocarpa
Potri.001G458600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49217751-49218750 Populus trichocarpa
Potri.001G458600 1.0kb downstream 1.0kb downstream 4977 true Chr01: 49212774-49217750 Populus trichocarpa
Potri.001G458600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49212774-49213773 Populus trichocarpa
Potri.001G458600 2.0kb upstream 2.0kb upstream 5977 true Chr01: 49213774-49219750 Populus trichocarpa
Potri.001G458600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49217751-49219750 Populus trichocarpa
Potri.001G458600 2.0kb downstream 2.0kb downstream 5977 true Chr01: 49211774-49217750 Populus trichocarpa
Potri.001G458600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49211774-49213773 Populus trichocarpa
Potri.001G458600 5.0kb upstream 5.0kb upstream 8977 true Chr01: 49213774-49222750 Populus trichocarpa
Potri.001G458600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49217751-49222750 Populus trichocarpa
Potri.001G458600 5.0kb downstream 5.0kb downstream 8977 true Chr01: 49208774-49217750 Populus trichocarpa
Potri.001G458600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49208774-49213773 Populus trichocarpa
Potri.001G458600 10.0kb upstream 10.0kb upstream 13977 true Chr01: 49213774-49227750 Populus trichocarpa
Potri.001G458600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49217751-49227750 Populus trichocarpa
Potri.001G458600 10.0kb downstream 10.0kb downstream 13977 true Chr01: 49203774-49217750 Populus trichocarpa
Potri.001G458600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49203774-49213773 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.592        
cufflinks 0.731        
cufflinks 0.387        
cufflinks 0.478        
cufflinks 0.223        
cufflinks 0.274        
cufflinks 0.629        
cufflinks 0.172       Low
cufflinks 0.638        
cufflinks 0.138       Low
cufflinks 2.327       High
cufflinks 0.165       Low
cufflinks 0.688        
cufflinks 0.166       Low
cufflinks 0.461        
cufflinks 0.736        
cufflinks 0.134       Low
cufflinks 0.169       Low
cufflinks 0.537        
cufflinks 0.719        
cufflinks 0.954       High
cufflinks 0.73        
cufflinks 0.279        
cufflinks 0.721        
cufflinks 16.149       High
cufflinks 14.335        
cufflinks 14.402        
cufflinks 15.994       High
cufflinks 14.548        
cufflinks 13.32        

0 Strain