Gene : Potri.001G390400 P. trichocarpa v3.0
Defline:  (1 of 3) K03627 - putative transcription factor (MBF1) Genomic Order:  3904
Name:  ? Potri.001G390400 Secondary Identifier:  ? PAC:27046533
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G390400 0.5kb upstream 0.5kb upstream 3094 true Chr01: 40843421-40846514 Populus trichocarpa
Potri.001G390400 0.5kb upstream 0.5kb upstream 500 false Chr01: 40846015-40846514 Populus trichocarpa
Potri.001G390400 0.5kb downstream 0.5kb downstream 3094 true Chr01: 40842921-40846014 Populus trichocarpa
Potri.001G390400 0.5kb downstream 0.5kb downstream 500 false Chr01: 40842921-40843420 Populus trichocarpa
Potri.001G390400 1.0kb upstream 1.0kb upstream 3594 true Chr01: 40843421-40847014 Populus trichocarpa
Potri.001G390400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40846015-40847014 Populus trichocarpa
Potri.001G390400 1.0kb downstream 1.0kb downstream 3594 true Chr01: 40842421-40846014 Populus trichocarpa
Potri.001G390400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40842421-40843420 Populus trichocarpa
Potri.001G390400 2.0kb upstream 2.0kb upstream 4594 true Chr01: 40843421-40848014 Populus trichocarpa
Potri.001G390400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40846015-40848014 Populus trichocarpa
Potri.001G390400 2.0kb downstream 2.0kb downstream 4594 true Chr01: 40841421-40846014 Populus trichocarpa
Potri.001G390400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40841421-40843420 Populus trichocarpa
Potri.001G390400 5.0kb upstream 5.0kb upstream 7594 true Chr01: 40843421-40851014 Populus trichocarpa
Potri.001G390400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40846015-40851014 Populus trichocarpa
Potri.001G390400 5.0kb downstream 5.0kb downstream 7594 true Chr01: 40838421-40846014 Populus trichocarpa
Potri.001G390400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40838421-40843420 Populus trichocarpa
Potri.001G390400 10.0kb upstream 10.0kb upstream 12594 true Chr01: 40843421-40856014 Populus trichocarpa
Potri.001G390400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40846015-40856014 Populus trichocarpa
Potri.001G390400 10.0kb downstream 10.0kb downstream 12594 true Chr01: 40833421-40846014 Populus trichocarpa
Potri.001G390400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40833421-40843420 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.471       Low
cufflinks 4.861        
cufflinks 5.304       High
cufflinks 6.732       High
cufflinks 5.63       High
cufflinks 4.513        
cufflinks 4.424        
cufflinks 3.359       Low
cufflinks 4.052        
cufflinks 4.65        
cufflinks 4.45        
cufflinks 3.53       Low
cufflinks 3.938        
cufflinks 3.827        
cufflinks 3.898        
cufflinks 3.345       Low
cufflinks 4.908        
cufflinks 5.792       High
cufflinks 4.899        
cufflinks 3.57       Low
cufflinks 3.486       Low
cufflinks 4.749        
cufflinks 4.671        
cufflinks 4.294        
cufflinks 55.315     High High
cufflinks 29.964     High Low
cufflinks 30.598     High Low
cufflinks 42.638     High  
cufflinks 49.577     High  
cufflinks 36.801     High  

0 Strain