Gene : Potri.001G113000 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  1130
Name:  ? Potri.001G113000 Secondary Identifier:  ? PAC:27045353
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G113000 0.5kb upstream 0.5kb upstream 4078 true Chr01: 9024999-9029076 Populus trichocarpa
Potri.001G113000 0.5kb upstream 0.5kb upstream 500 false Chr01: 9028577-9029076 Populus trichocarpa
Potri.001G113000 0.5kb downstream 0.5kb downstream 4078 true Chr01: 9024499-9028576 Populus trichocarpa
Potri.001G113000 0.5kb downstream 0.5kb downstream 500 false Chr01: 9024499-9024998 Populus trichocarpa
Potri.001G113000 1.0kb upstream 1.0kb upstream 4578 true Chr01: 9024999-9029576 Populus trichocarpa
Potri.001G113000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9028577-9029576 Populus trichocarpa
Potri.001G113000 1.0kb downstream 1.0kb downstream 4578 true Chr01: 9023999-9028576 Populus trichocarpa
Potri.001G113000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9023999-9024998 Populus trichocarpa
Potri.001G113000 2.0kb upstream 2.0kb upstream 5578 true Chr01: 9024999-9030576 Populus trichocarpa
Potri.001G113000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9028577-9030576 Populus trichocarpa
Potri.001G113000 2.0kb downstream 2.0kb downstream 5578 true Chr01: 9022999-9028576 Populus trichocarpa
Potri.001G113000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9022999-9024998 Populus trichocarpa
Potri.001G113000 5.0kb upstream 5.0kb upstream 8578 true Chr01: 9024999-9033576 Populus trichocarpa
Potri.001G113000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9028577-9033576 Populus trichocarpa
Potri.001G113000 5.0kb downstream 5.0kb downstream 8578 true Chr01: 9019999-9028576 Populus trichocarpa
Potri.001G113000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9019999-9024998 Populus trichocarpa
Potri.001G113000 10.0kb upstream 10.0kb upstream 13578 true Chr01: 9024999-9038576 Populus trichocarpa
Potri.001G113000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9028577-9038576 Populus trichocarpa
Potri.001G113000 10.0kb downstream 10.0kb downstream 13578 true Chr01: 9014999-9028576 Populus trichocarpa
Potri.001G113000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9014999-9024998 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.054     Low Low
cufflinks 3.676        
cufflinks 2.689        
cufflinks 4.49       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.587        
cufflinks 1.425        
cufflinks 0.883        
cufflinks 6.485       High
cufflinks 2.179        
cufflinks 0.208        
cufflinks 0.573        
cufflinks 1.713        
cufflinks 0.535        
cufflinks 0.157        
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.946       High
cufflinks 0.245        
cufflinks 0.003     Low Low
cufflinks 0.215        
cufflinks 0.603        
cufflinks 0.665        
cufflinks 0.267        
cufflinks 10.16        
cufflinks 9.746        
cufflinks 12.548       High
cufflinks 13.367       High
cufflinks 8.349        
cufflinks 9.71        

0 Strain