Gene : Potri.001G401800 P. trichocarpa v3.0
Defline:  (1 of 5) PF07333 - S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) (SLR1-BP) Genomic Order:  4018
Name:  ? Potri.001G401800 Secondary Identifier:  ? PAC:27048215
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G401800 0.5kb upstream 0.5kb upstream 1530 true Chr01: 42312327-42313856 Populus trichocarpa
Potri.001G401800 0.5kb upstream 0.5kb upstream 500 false Chr01: 42312327-42312826 Populus trichocarpa
Potri.001G401800 0.5kb downstream 0.5kb downstream 1530 true Chr01: 42312827-42314356 Populus trichocarpa
Potri.001G401800 0.5kb downstream 0.5kb downstream 500 false Chr01: 42313857-42314356 Populus trichocarpa
Potri.001G401800 1.0kb upstream 1.0kb upstream 2030 true Chr01: 42311827-42313856 Populus trichocarpa
Potri.001G401800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42311827-42312826 Populus trichocarpa
Potri.001G401800 1.0kb downstream 1.0kb downstream 2030 true Chr01: 42312827-42314856 Populus trichocarpa
Potri.001G401800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42313857-42314856 Populus trichocarpa
Potri.001G401800 2.0kb upstream 2.0kb upstream 3030 true Chr01: 42310827-42313856 Populus trichocarpa
Potri.001G401800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42310827-42312826 Populus trichocarpa
Potri.001G401800 2.0kb downstream 2.0kb downstream 3030 true Chr01: 42312827-42315856 Populus trichocarpa
Potri.001G401800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42313857-42315856 Populus trichocarpa
Potri.001G401800 5.0kb upstream 5.0kb upstream 6030 true Chr01: 42307827-42313856 Populus trichocarpa
Potri.001G401800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42307827-42312826 Populus trichocarpa
Potri.001G401800 5.0kb downstream 5.0kb downstream 6030 true Chr01: 42312827-42318856 Populus trichocarpa
Potri.001G401800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42313857-42318856 Populus trichocarpa
Potri.001G401800 10.0kb upstream 10.0kb upstream 11030 true Chr01: 42302827-42313856 Populus trichocarpa
Potri.001G401800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42302827-42312826 Populus trichocarpa
Potri.001G401800 10.0kb downstream 10.0kb downstream 11030 true Chr01: 42312827-42323856 Populus trichocarpa
Potri.001G401800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42313857-42323856 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.141       High
cufflinks 0.025     Low Low
cufflinks 0.502        
cufflinks 0.866       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.175        
cufflinks 0.491        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.386        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14     Low  
cufflinks 0.097     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.21        
cufflinks 0.548        
cufflinks 0.05     Low Low
cufflinks 0.199        
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low Low
cufflinks 0.277        
cufflinks 0.965       High
cufflinks 0.043     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low  
cufflinks 0.588       High

0 Strain