Gene : Potri.001G335600 P. trichocarpa v3.0
Defline:  (1 of 1) K17435 - large subunit ribosomal protein L54 (MRPL54) Genomic Order:  3356
Name:  ? Potri.001G335600 Secondary Identifier:  ? PAC:27047740
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G335600 0.5kb upstream 0.5kb upstream 2155 true Chr01: 33881809-33883963 Populus trichocarpa
Potri.001G335600 0.5kb upstream 0.5kb upstream 500 false Chr01: 33883464-33883963 Populus trichocarpa
Potri.001G335600 0.5kb downstream 0.5kb downstream 2155 true Chr01: 33881309-33883463 Populus trichocarpa
Potri.001G335600 0.5kb downstream 0.5kb downstream 500 false Chr01: 33881309-33881808 Populus trichocarpa
Potri.001G335600 1.0kb upstream 1.0kb upstream 2655 true Chr01: 33881809-33884463 Populus trichocarpa
Potri.001G335600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33883464-33884463 Populus trichocarpa
Potri.001G335600 1.0kb downstream 1.0kb downstream 2655 true Chr01: 33880809-33883463 Populus trichocarpa
Potri.001G335600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33880809-33881808 Populus trichocarpa
Potri.001G335600 2.0kb upstream 2.0kb upstream 3655 true Chr01: 33881809-33885463 Populus trichocarpa
Potri.001G335600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33883464-33885463 Populus trichocarpa
Potri.001G335600 2.0kb downstream 2.0kb downstream 3655 true Chr01: 33879809-33883463 Populus trichocarpa
Potri.001G335600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33879809-33881808 Populus trichocarpa
Potri.001G335600 5.0kb upstream 5.0kb upstream 6655 true Chr01: 33881809-33888463 Populus trichocarpa
Potri.001G335600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33883464-33888463 Populus trichocarpa
Potri.001G335600 5.0kb downstream 5.0kb downstream 6655 true Chr01: 33876809-33883463 Populus trichocarpa
Potri.001G335600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33876809-33881808 Populus trichocarpa
Potri.001G335600 10.0kb upstream 10.0kb upstream 11655 true Chr01: 33881809-33893463 Populus trichocarpa
Potri.001G335600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33883464-33893463 Populus trichocarpa
Potri.001G335600 10.0kb downstream 10.0kb downstream 11655 true Chr01: 33871809-33883463 Populus trichocarpa
Potri.001G335600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33871809-33881808 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.893        
cufflinks 3.284       Low
cufflinks 7.033        
cufflinks 2.729       Low
cufflinks 8.589        
cufflinks 5.812        
cufflinks 6.421        
cufflinks 6.412        
cufflinks 4.715       Low
cufflinks 6.248        
cufflinks 8.704        
cufflinks 6.61        
cufflinks 7.009        
cufflinks 7.67        
cufflinks 13.223     High High
cufflinks 7.632        
cufflinks 10.623     High High
cufflinks 6.205        
cufflinks 6.391        
cufflinks 7.696        
cufflinks 5.344        
cufflinks 8.836        
cufflinks 8.254     High  
cufflinks 6.775        
cufflinks 26.256        
cufflinks 20.543        
cufflinks 21.353        
cufflinks 37.866     High High
cufflinks 39.572     High High
cufflinks 22.131        

0 Strain