Gene : Potri.011G139500 P. trichocarpa v3.0
Defline:  (1 of 2) K13719 - ubiquitin thioesterase OTU1 (OTU1, YOD1) Genomic Order:  1395
Name:  ? Potri.011G139500 Secondary Identifier:  ? PAC:27000754
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G139500 0.5kb upstream 0.5kb upstream 5827 true Chr11: 16177020-16182846 Populus trichocarpa
Potri.011G139500 0.5kb upstream 0.5kb upstream 500 false Chr11: 16182347-16182846 Populus trichocarpa
Potri.011G139500 0.5kb downstream 0.5kb downstream 5827 true Chr11: 16176520-16182346 Populus trichocarpa
Potri.011G139500 0.5kb downstream 0.5kb downstream 500 false Chr11: 16176520-16177019 Populus trichocarpa
Potri.011G139500 1.0kb upstream 1.0kb upstream 6327 true Chr11: 16177020-16183346 Populus trichocarpa
Potri.011G139500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 16182347-16183346 Populus trichocarpa
Potri.011G139500 1.0kb downstream 1.0kb downstream 6327 true Chr11: 16176020-16182346 Populus trichocarpa
Potri.011G139500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16176020-16177019 Populus trichocarpa
Potri.011G139500 2.0kb upstream 2.0kb upstream 7327 true Chr11: 16177020-16184346 Populus trichocarpa
Potri.011G139500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 16182347-16184346 Populus trichocarpa
Potri.011G139500 2.0kb downstream 2.0kb downstream 7327 true Chr11: 16175020-16182346 Populus trichocarpa
Potri.011G139500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16175020-16177019 Populus trichocarpa
Potri.011G139500 5.0kb upstream 5.0kb upstream 10327 true Chr11: 16177020-16187346 Populus trichocarpa
Potri.011G139500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 16182347-16187346 Populus trichocarpa
Potri.011G139500 5.0kb downstream 5.0kb downstream 10327 true Chr11: 16172020-16182346 Populus trichocarpa
Potri.011G139500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16172020-16177019 Populus trichocarpa
Potri.011G139500 10.0kb upstream 10.0kb upstream 15327 true Chr11: 16177020-16192346 Populus trichocarpa
Potri.011G139500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 16182347-16192346 Populus trichocarpa
Potri.011G139500 10.0kb downstream 10.0kb downstream 15327 true Chr11: 16167020-16182346 Populus trichocarpa
Potri.011G139500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16167020-16177019 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.525        
cufflinks 1.887        
cufflinks 1.465        
cufflinks 1.437        
cufflinks 1.245        
cufflinks 0.823       Low
cufflinks 0.815       Low
cufflinks 2.349       High
cufflinks 1.58        
cufflinks 1.36        
cufflinks 2.988       High
cufflinks 1.554        
cufflinks 1.491        
cufflinks 1.241        
cufflinks 2.128       High
cufflinks 1.189        
cufflinks 1.532        
cufflinks 1.658        
cufflinks 1.162        
cufflinks 1.439        
cufflinks 1.886        
cufflinks 1.48        
cufflinks 1.565        
cufflinks 1.37        
cufflinks 23.947       High
cufflinks 17.388        
cufflinks 19.714        
cufflinks 17.714        
cufflinks 18.875        
cufflinks 20.993        

0 Strain