Gene : Potri.011G139600 P. trichocarpa v3.0
Defline:  (1 of 3) 3.5.99.10 - 2-iminobutanoate/2-iminopropanoate deaminase / Enamine/imine deaminase Genomic Order:  1396
Name:  ? Potri.011G139600 Secondary Identifier:  ? PAC:27001352
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY0-1535 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6196 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G139600 0.5kb upstream 0.5kb upstream 3629 true Chr11: 16183261-16186889 Populus trichocarpa
Potri.011G139600 0.5kb upstream 0.5kb upstream 500 false Chr11: 16186390-16186889 Populus trichocarpa
Potri.011G139600 0.5kb downstream 0.5kb downstream 3629 true Chr11: 16182761-16186389 Populus trichocarpa
Potri.011G139600 0.5kb downstream 0.5kb downstream 500 false Chr11: 16182761-16183260 Populus trichocarpa
Potri.011G139600 1.0kb upstream 1.0kb upstream 4129 true Chr11: 16183261-16187389 Populus trichocarpa
Potri.011G139600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 16186390-16187389 Populus trichocarpa
Potri.011G139600 1.0kb downstream 1.0kb downstream 4129 true Chr11: 16182261-16186389 Populus trichocarpa
Potri.011G139600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16182261-16183260 Populus trichocarpa
Potri.011G139600 2.0kb upstream 2.0kb upstream 5129 true Chr11: 16183261-16188389 Populus trichocarpa
Potri.011G139600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 16186390-16188389 Populus trichocarpa
Potri.011G139600 2.0kb downstream 2.0kb downstream 5129 true Chr11: 16181261-16186389 Populus trichocarpa
Potri.011G139600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16181261-16183260 Populus trichocarpa
Potri.011G139600 5.0kb upstream 5.0kb upstream 8129 true Chr11: 16183261-16191389 Populus trichocarpa
Potri.011G139600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 16186390-16191389 Populus trichocarpa
Potri.011G139600 5.0kb downstream 5.0kb downstream 8129 true Chr11: 16178261-16186389 Populus trichocarpa
Potri.011G139600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16178261-16183260 Populus trichocarpa
Potri.011G139600 10.0kb upstream 10.0kb upstream 13129 true Chr11: 16183261-16196389 Populus trichocarpa
Potri.011G139600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 16186390-16196389 Populus trichocarpa
Potri.011G139600 10.0kb downstream 10.0kb downstream 13129 true Chr11: 16173261-16186389 Populus trichocarpa
Potri.011G139600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16173261-16183260 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.851        
cufflinks 1.482        
cufflinks 0.89       Low
cufflinks 2.116        
cufflinks 2.05        
cufflinks 3.192       High
cufflinks 1.941        
cufflinks 1.092       Low
cufflinks 2.169        
cufflinks 1.645        
cufflinks 1.669        
cufflinks 3.135       High
cufflinks 1.968        
cufflinks 2.796        
cufflinks 2.81        
cufflinks 2.494        
cufflinks 3.752       High
cufflinks 1.041       Low
cufflinks 2.361        
cufflinks 1.819        
cufflinks 1.393        
cufflinks 0.622       Low
cufflinks 2.413        
cufflinks 2.927        
cufflinks 2.943        
cufflinks 18.476       High
cufflinks 11.209       Low
cufflinks 10.889       Low
cufflinks 15.005        
cufflinks 12.449        

0 Strain