Gene : Potri.001G396600 P. trichocarpa v3.0
Defline:  (1 of 1) K02968 - small subunit ribosomal protein S20 (RP-S20, rpsT) Genomic Order:  3966
Name:  ? Potri.001G396600 Secondary Identifier:  ? PAC:27042121
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G396600 0.5kb upstream 0.5kb upstream 4075 true Chr01: 41760437-41764511 Populus trichocarpa
Potri.001G396600 0.5kb upstream 0.5kb upstream 500 false Chr01: 41760437-41760936 Populus trichocarpa
Potri.001G396600 0.5kb downstream 0.5kb downstream 4075 true Chr01: 41760937-41765011 Populus trichocarpa
Potri.001G396600 0.5kb downstream 0.5kb downstream 500 false Chr01: 41764512-41765011 Populus trichocarpa
Potri.001G396600 1.0kb upstream 1.0kb upstream 4575 true Chr01: 41759937-41764511 Populus trichocarpa
Potri.001G396600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41759937-41760936 Populus trichocarpa
Potri.001G396600 1.0kb downstream 1.0kb downstream 4575 true Chr01: 41760937-41765511 Populus trichocarpa
Potri.001G396600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41764512-41765511 Populus trichocarpa
Potri.001G396600 2.0kb upstream 2.0kb upstream 5575 true Chr01: 41758937-41764511 Populus trichocarpa
Potri.001G396600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41758937-41760936 Populus trichocarpa
Potri.001G396600 2.0kb downstream 2.0kb downstream 5575 true Chr01: 41760937-41766511 Populus trichocarpa
Potri.001G396600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41764512-41766511 Populus trichocarpa
Potri.001G396600 5.0kb upstream 5.0kb upstream 8575 true Chr01: 41755937-41764511 Populus trichocarpa
Potri.001G396600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41755937-41760936 Populus trichocarpa
Potri.001G396600 5.0kb downstream 5.0kb downstream 8575 true Chr01: 41760937-41769511 Populus trichocarpa
Potri.001G396600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41764512-41769511 Populus trichocarpa
Potri.001G396600 10.0kb upstream 10.0kb upstream 13575 true Chr01: 41750937-41764511 Populus trichocarpa
Potri.001G396600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41750937-41760936 Populus trichocarpa
Potri.001G396600 10.0kb downstream 10.0kb downstream 13575 true Chr01: 41760937-41774511 Populus trichocarpa
Potri.001G396600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41764512-41774511 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.866        
cufflinks 26.902     High  
cufflinks 76.264     High High
cufflinks 30.101     High  
cufflinks 15.209     High  
cufflinks 2.169       Low
cufflinks 6.184        
cufflinks 19.594     High  
cufflinks 5.958        
cufflinks 2.109       Low
cufflinks 22.697     High  
cufflinks 27.725     High  
cufflinks 9.818     High  
cufflinks 8.925        
cufflinks 21.571     High  
cufflinks 1.426       Low
cufflinks 2.083       Low
cufflinks 29.504     High  
cufflinks 5.161        
cufflinks 32.443     High High
cufflinks 6.128        
cufflinks 22.35     High  
cufflinks 6.252        
cufflinks 19.49     High  
cufflinks 59.801     High  
cufflinks 74.65     High  
cufflinks 78.839     High  
cufflinks 60.276     High  
cufflinks 56.281     High  
cufflinks 58.219     High  

0 Strain