Gene : Potri.001G341100 P. trichocarpa v3.0
Defline:  (1 of 2) K09494 - T-complex protein 1 subunit beta (CCT2) Genomic Order:  3411
Name:  ? Potri.001G341100 Secondary Identifier:  ? PAC:27044658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G341100 0.5kb upstream 0.5kb upstream 5563 true Chr01: 34593578-34599140 Populus trichocarpa
Potri.001G341100 0.5kb upstream 0.5kb upstream 500 false Chr01: 34598641-34599140 Populus trichocarpa
Potri.001G341100 0.5kb downstream 0.5kb downstream 5563 true Chr01: 34593078-34598640 Populus trichocarpa
Potri.001G341100 0.5kb downstream 0.5kb downstream 500 false Chr01: 34593078-34593577 Populus trichocarpa
Potri.001G341100 1.0kb upstream 1.0kb upstream 6063 true Chr01: 34593578-34599640 Populus trichocarpa
Potri.001G341100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 34598641-34599640 Populus trichocarpa
Potri.001G341100 1.0kb downstream 1.0kb downstream 6063 true Chr01: 34592578-34598640 Populus trichocarpa
Potri.001G341100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 34592578-34593577 Populus trichocarpa
Potri.001G341100 2.0kb upstream 2.0kb upstream 7063 true Chr01: 34593578-34600640 Populus trichocarpa
Potri.001G341100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 34598641-34600640 Populus trichocarpa
Potri.001G341100 2.0kb downstream 2.0kb downstream 7063 true Chr01: 34591578-34598640 Populus trichocarpa
Potri.001G341100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 34591578-34593577 Populus trichocarpa
Potri.001G341100 5.0kb upstream 5.0kb upstream 10063 true Chr01: 34593578-34603640 Populus trichocarpa
Potri.001G341100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 34598641-34603640 Populus trichocarpa
Potri.001G341100 5.0kb downstream 5.0kb downstream 10063 true Chr01: 34588578-34598640 Populus trichocarpa
Potri.001G341100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 34588578-34593577 Populus trichocarpa
Potri.001G341100 10.0kb upstream 10.0kb upstream 15063 true Chr01: 34593578-34608640 Populus trichocarpa
Potri.001G341100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 34598641-34608640 Populus trichocarpa
Potri.001G341100 10.0kb downstream 10.0kb downstream 15063 true Chr01: 34583578-34598640 Populus trichocarpa
Potri.001G341100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 34583578-34593577 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.038     High  
cufflinks 10.217     High  
cufflinks 10.796     High  
cufflinks 4.439       Low
cufflinks 9.164        
cufflinks 10.67     High  
cufflinks 11.086     High  
cufflinks 8.476        
cufflinks 11.754     High  
cufflinks 6.405       Low
cufflinks 6.785       Low
cufflinks 10.498     High  
cufflinks 10.43        
cufflinks 5.713       Low
cufflinks 7.383        
cufflinks 13.664     High High
cufflinks 8.864        
cufflinks 9.599        
cufflinks 8.877        
cufflinks 7.167        
cufflinks 13.677     High High
cufflinks 9.73     High  
cufflinks 8.25        
cufflinks 11.447     High  
cufflinks 90.998     High  
cufflinks 75.209     High  
cufflinks 77.607     High  
cufflinks 104.479     High  
cufflinks 114.308     High  
cufflinks 76.413     High  

0 Strain