Gene : Potri.001G113800 P. trichocarpa v3.0
Defline:  (1 of 2) K04569 - copper chaperone for superoxide dismutase (CCS) Genomic Order:  1138
Name:  ? Potri.001G113800 Secondary Identifier:  ? PAC:27044425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G113800 0.5kb upstream 0.5kb upstream 3792 true Chr01: 9102189-9105980 Populus trichocarpa
Potri.001G113800 0.5kb upstream 0.5kb upstream 500 false Chr01: 9102189-9102688 Populus trichocarpa
Potri.001G113800 0.5kb downstream 0.5kb downstream 3792 true Chr01: 9102689-9106480 Populus trichocarpa
Potri.001G113800 0.5kb downstream 0.5kb downstream 500 false Chr01: 9105981-9106480 Populus trichocarpa
Potri.001G113800 1.0kb upstream 1.0kb upstream 4292 true Chr01: 9101689-9105980 Populus trichocarpa
Potri.001G113800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9101689-9102688 Populus trichocarpa
Potri.001G113800 1.0kb downstream 1.0kb downstream 4292 true Chr01: 9102689-9106980 Populus trichocarpa
Potri.001G113800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9105981-9106980 Populus trichocarpa
Potri.001G113800 2.0kb upstream 2.0kb upstream 5292 true Chr01: 9100689-9105980 Populus trichocarpa
Potri.001G113800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9100689-9102688 Populus trichocarpa
Potri.001G113800 2.0kb downstream 2.0kb downstream 5292 true Chr01: 9102689-9107980 Populus trichocarpa
Potri.001G113800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9105981-9107980 Populus trichocarpa
Potri.001G113800 5.0kb upstream 5.0kb upstream 8292 true Chr01: 9097689-9105980 Populus trichocarpa
Potri.001G113800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9097689-9102688 Populus trichocarpa
Potri.001G113800 5.0kb downstream 5.0kb downstream 8292 true Chr01: 9102689-9110980 Populus trichocarpa
Potri.001G113800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9105981-9110980 Populus trichocarpa
Potri.001G113800 10.0kb upstream 10.0kb upstream 13292 true Chr01: 9092689-9105980 Populus trichocarpa
Potri.001G113800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9092689-9102688 Populus trichocarpa
Potri.001G113800 10.0kb downstream 10.0kb downstream 13292 true Chr01: 9102689-9115980 Populus trichocarpa
Potri.001G113800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9105981-9115980 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.166        
cufflinks 19.326     High High
cufflinks 13.267     High High
cufflinks 5.863        
cufflinks 6.677        
cufflinks 12.484     High High
cufflinks 5.265        
cufflinks 8.429        
cufflinks 7.533        
cufflinks 4.11       Low
cufflinks 6.309        
cufflinks 5.268        
cufflinks 6.901        
cufflinks 8.58        
cufflinks 9.409        
cufflinks 10.117     High  
cufflinks 4.403       Low
cufflinks 5.845        
cufflinks 5.72        
cufflinks 6.221        
cufflinks 5.221        
cufflinks 7.842        
cufflinks 6.469        
cufflinks 5.515        
cufflinks 53.017     High  
cufflinks 43.771     High  
cufflinks 39.166     High  
cufflinks 52.557     High  
cufflinks 43.185     High  
cufflinks 51.229     High  

0 Strain