Gene : Potri.001G394300 P. trichocarpa v3.0
Defline:  (1 of 1) 2.4.1.142 - Chitobiosyldiphosphodolichol beta-mannosyltransferase / mannosyltransferase Genomic Order:  3943
Name:  ? Potri.001G394300 Secondary Identifier:  ? PAC:27046972
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G394300 0.5kb upstream 0.5kb upstream 5570 true Chr01: 41360521-41366090 Populus trichocarpa
Potri.001G394300 0.5kb upstream 0.5kb upstream 500 false Chr01: 41365591-41366090 Populus trichocarpa
Potri.001G394300 0.5kb downstream 0.5kb downstream 5570 true Chr01: 41360021-41365590 Populus trichocarpa
Potri.001G394300 0.5kb downstream 0.5kb downstream 500 false Chr01: 41360021-41360520 Populus trichocarpa
Potri.001G394300 1.0kb upstream 1.0kb upstream 6070 true Chr01: 41360521-41366590 Populus trichocarpa
Potri.001G394300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41365591-41366590 Populus trichocarpa
Potri.001G394300 1.0kb downstream 1.0kb downstream 6070 true Chr01: 41359521-41365590 Populus trichocarpa
Potri.001G394300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 41359521-41360520 Populus trichocarpa
Potri.001G394300 2.0kb upstream 2.0kb upstream 7070 true Chr01: 41360521-41367590 Populus trichocarpa
Potri.001G394300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41365591-41367590 Populus trichocarpa
Potri.001G394300 2.0kb downstream 2.0kb downstream 7070 true Chr01: 41358521-41365590 Populus trichocarpa
Potri.001G394300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 41358521-41360520 Populus trichocarpa
Potri.001G394300 5.0kb upstream 5.0kb upstream 10070 true Chr01: 41360521-41370590 Populus trichocarpa
Potri.001G394300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41365591-41370590 Populus trichocarpa
Potri.001G394300 5.0kb downstream 5.0kb downstream 10070 true Chr01: 41355521-41365590 Populus trichocarpa
Potri.001G394300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 41355521-41360520 Populus trichocarpa
Potri.001G394300 10.0kb upstream 10.0kb upstream 15070 true Chr01: 41360521-41375590 Populus trichocarpa
Potri.001G394300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41365591-41375590 Populus trichocarpa
Potri.001G394300 10.0kb downstream 10.0kb downstream 15070 true Chr01: 41350521-41365590 Populus trichocarpa
Potri.001G394300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 41350521-41360520 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.885       Low
cufflinks 1.442       High
cufflinks 2.023       High
cufflinks 1.47       High
cufflinks 1.349        
cufflinks 0.759       Low
cufflinks 1.054        
cufflinks 0.927        
cufflinks 1.206        
cufflinks 0.816       Low
cufflinks 1.304        
cufflinks 0.927        
cufflinks 0.897        
cufflinks 0.984        
cufflinks 1.004        
cufflinks 1.434       High
cufflinks 1.125        
cufflinks 0.831       Low
cufflinks 1.268        
cufflinks 1.074        
cufflinks 0.982        
cufflinks 1.463       High
cufflinks 1.38        
cufflinks 1.175        
cufflinks 13.17        
cufflinks 14.802        
cufflinks 15.319        
cufflinks 15.91        
cufflinks 17.203       High
cufflinks 16.678       High

0 Strain