Gene : Potri.014G148700 P. trichocarpa v3.0
Defline:  (1 of 2) 1.3.5.5 - 15-cis-phytoene desaturase / Plant-type phytoene desaturase Genomic Order:  1487
Name:  ? Potri.014G148700 Secondary Identifier:  ? PAC:27033690
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CAROTENOID-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6475 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G148700 0.5kb upstream 0.5kb upstream 10297 true Chr14: 11347884-11358180 Populus trichocarpa
Potri.014G148700 0.5kb upstream 0.5kb upstream 500 false Chr14: 11357681-11358180 Populus trichocarpa
Potri.014G148700 0.5kb downstream 0.5kb downstream 10297 true Chr14: 11347384-11357680 Populus trichocarpa
Potri.014G148700 0.5kb downstream 0.5kb downstream 500 false Chr14: 11347384-11347883 Populus trichocarpa
Potri.014G148700 1.0kb upstream 1.0kb upstream 10797 true Chr14: 11347884-11358680 Populus trichocarpa
Potri.014G148700 1.0kb upstream 1.0kb upstream 1000 false Chr14: 11357681-11358680 Populus trichocarpa
Potri.014G148700 1.0kb downstream 1.0kb downstream 10797 true Chr14: 11346884-11357680 Populus trichocarpa
Potri.014G148700 1.0kb downstream 1.0kb downstream 1000 false Chr14: 11346884-11347883 Populus trichocarpa
Potri.014G148700 2.0kb upstream 2.0kb upstream 11797 true Chr14: 11347884-11359680 Populus trichocarpa
Potri.014G148700 2.0kb upstream 2.0kb upstream 2000 false Chr14: 11357681-11359680 Populus trichocarpa
Potri.014G148700 2.0kb downstream 2.0kb downstream 11797 true Chr14: 11345884-11357680 Populus trichocarpa
Potri.014G148700 2.0kb downstream 2.0kb downstream 2000 false Chr14: 11345884-11347883 Populus trichocarpa
Potri.014G148700 5.0kb upstream 5.0kb upstream 14797 true Chr14: 11347884-11362680 Populus trichocarpa
Potri.014G148700 5.0kb upstream 5.0kb upstream 5000 false Chr14: 11357681-11362680 Populus trichocarpa
Potri.014G148700 5.0kb downstream 5.0kb downstream 14797 true Chr14: 11342884-11357680 Populus trichocarpa
Potri.014G148700 5.0kb downstream 5.0kb downstream 5000 false Chr14: 11342884-11347883 Populus trichocarpa
Potri.014G148700 10.0kb upstream 10.0kb upstream 19797 true Chr14: 11347884-11367680 Populus trichocarpa
Potri.014G148700 10.0kb upstream 10.0kb upstream 10000 false Chr14: 11357681-11367680 Populus trichocarpa
Potri.014G148700 10.0kb downstream 10.0kb downstream 19797 true Chr14: 11337884-11357680 Populus trichocarpa
Potri.014G148700 10.0kb downstream 10.0kb downstream 10000 false Chr14: 11337884-11347883 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.088        
cufflinks 1.447        
cufflinks 1.733        
cufflinks 1.198        
cufflinks 1.622        
cufflinks 0.867        
cufflinks 1.031        
cufflinks 0.919        
cufflinks 1.696        
cufflinks 1.055        
cufflinks 1.199        
cufflinks 1.592        
cufflinks 11.18     High High
cufflinks 0.688        
cufflinks 1.455        
cufflinks 0.699        
cufflinks 0.976        
cufflinks 4.738       High
cufflinks 0.781        
cufflinks 1.045        
cufflinks 18.411     High High
cufflinks 0.933        
cufflinks 0.986        
cufflinks 1.208        
cufflinks 33.778     High  
cufflinks 37.283     High  
cufflinks 28.732     High  
cufflinks 27.345        
cufflinks 21.733       Low
cufflinks 38.743     High  

0 Strain