Gene : Potri.001G454400 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR21433//PTHR21433:SF4 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA // SUBFAMILY NOT NAMED Genomic Order:  4544
Name:  ? Potri.001G454400 Secondary Identifier:  ? PAC:27046244
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G454400 0.5kb upstream 0.5kb upstream 6892 true Chr01: 48894519-48901410 Populus trichocarpa
Potri.001G454400 0.5kb upstream 0.5kb upstream 500 false Chr01: 48894519-48895018 Populus trichocarpa
Potri.001G454400 0.5kb downstream 0.5kb downstream 6892 true Chr01: 48895019-48901910 Populus trichocarpa
Potri.001G454400 0.5kb downstream 0.5kb downstream 500 false Chr01: 48901411-48901910 Populus trichocarpa
Potri.001G454400 1.0kb upstream 1.0kb upstream 7392 true Chr01: 48894019-48901410 Populus trichocarpa
Potri.001G454400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48894019-48895018 Populus trichocarpa
Potri.001G454400 1.0kb downstream 1.0kb downstream 7392 true Chr01: 48895019-48902410 Populus trichocarpa
Potri.001G454400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48901411-48902410 Populus trichocarpa
Potri.001G454400 2.0kb upstream 2.0kb upstream 8392 true Chr01: 48893019-48901410 Populus trichocarpa
Potri.001G454400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48893019-48895018 Populus trichocarpa
Potri.001G454400 2.0kb downstream 2.0kb downstream 8392 true Chr01: 48895019-48903410 Populus trichocarpa
Potri.001G454400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48901411-48903410 Populus trichocarpa
Potri.001G454400 5.0kb upstream 5.0kb upstream 11392 true Chr01: 48890019-48901410 Populus trichocarpa
Potri.001G454400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48890019-48895018 Populus trichocarpa
Potri.001G454400 5.0kb downstream 5.0kb downstream 11392 true Chr01: 48895019-48906410 Populus trichocarpa
Potri.001G454400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48901411-48906410 Populus trichocarpa
Potri.001G454400 10.0kb upstream 10.0kb upstream 16392 true Chr01: 48885019-48901410 Populus trichocarpa
Potri.001G454400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48885019-48895018 Populus trichocarpa
Potri.001G454400 10.0kb downstream 10.0kb downstream 16392 true Chr01: 48895019-48911410 Populus trichocarpa
Potri.001G454400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48901411-48911410 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.565        
cufflinks 12.053     High High
cufflinks 4.251        
cufflinks 4.933        
cufflinks 3.293        
cufflinks 4.014        
cufflinks 3.162        
cufflinks 2.06       Low
cufflinks 2.683        
cufflinks 3.222        
cufflinks 2.135       Low
cufflinks 3.117        
cufflinks 3.28        
cufflinks 2.591       Low
cufflinks 3.697        
cufflinks 3.929        
cufflinks 4.755        
cufflinks 3.419        
cufflinks 4.389        
cufflinks 3.236        
cufflinks 3.45        
cufflinks 5.753       High
cufflinks 4.392        
cufflinks 3.639        
cufflinks 93.906     High  
cufflinks 83.687     High  
cufflinks 38.765     High  
cufflinks 49.714     High  
cufflinks 23.642       Low
cufflinks 115.047     High  

0 Strain