Gene : Potri.011G142900 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR21043:SF1 - PROTEIN IOJAP, CHLOROPLASTIC Genomic Order:  1429
Name:  ? Potri.011G142900 Secondary Identifier:  ? PAC:27002705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G142900 0.5kb upstream 0.5kb upstream 5722 true Chr11: 16401193-16406914 Populus trichocarpa
Potri.011G142900 0.5kb upstream 0.5kb upstream 500 false Chr11: 16401193-16401692 Populus trichocarpa
Potri.011G142900 0.5kb downstream 0.5kb downstream 5722 true Chr11: 16401693-16407414 Populus trichocarpa
Potri.011G142900 0.5kb downstream 0.5kb downstream 500 false Chr11: 16406915-16407414 Populus trichocarpa
Potri.011G142900 1.0kb upstream 1.0kb upstream 6222 true Chr11: 16400693-16406914 Populus trichocarpa
Potri.011G142900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 16400693-16401692 Populus trichocarpa
Potri.011G142900 1.0kb downstream 1.0kb downstream 6222 true Chr11: 16401693-16407914 Populus trichocarpa
Potri.011G142900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16406915-16407914 Populus trichocarpa
Potri.011G142900 2.0kb upstream 2.0kb upstream 7222 true Chr11: 16399693-16406914 Populus trichocarpa
Potri.011G142900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 16399693-16401692 Populus trichocarpa
Potri.011G142900 2.0kb downstream 2.0kb downstream 7222 true Chr11: 16401693-16408914 Populus trichocarpa
Potri.011G142900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16406915-16408914 Populus trichocarpa
Potri.011G142900 5.0kb upstream 5.0kb upstream 10222 true Chr11: 16396693-16406914 Populus trichocarpa
Potri.011G142900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 16396693-16401692 Populus trichocarpa
Potri.011G142900 5.0kb downstream 5.0kb downstream 10222 true Chr11: 16401693-16411914 Populus trichocarpa
Potri.011G142900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16406915-16411914 Populus trichocarpa
Potri.011G142900 10.0kb upstream 10.0kb upstream 15222 true Chr11: 16391693-16406914 Populus trichocarpa
Potri.011G142900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 16391693-16401692 Populus trichocarpa
Potri.011G142900 10.0kb downstream 10.0kb downstream 15222 true Chr11: 16401693-16416914 Populus trichocarpa
Potri.011G142900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16406915-16416914 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.88       Low
cufflinks 6.39       High
cufflinks 4.953       High
cufflinks 0.91       Low
cufflinks 3.233        
cufflinks 4.221       High
cufflinks 2.54        
cufflinks 3.872       High
cufflinks 2.279        
cufflinks 2.179        
cufflinks 1.735        
cufflinks 2.971        
cufflinks 1.307        
cufflinks 4.057       High
cufflinks 1.078       Low
cufflinks 3.647        
cufflinks 2.391        
cufflinks 1.44        
cufflinks 1.518        
cufflinks 1.111       Low
cufflinks 1.271        
cufflinks 1.663        
cufflinks 1.429        
cufflinks 2.36        
cufflinks 12.31        
cufflinks 11.537        
cufflinks 12.267        
cufflinks 14.757       High
cufflinks 11.299        
cufflinks 11.949        

0 Strain