Gene : Potri.009G021800 P. trichocarpa v3.0
Defline:  (1 of 2) 2.7.1.148 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase / CMK Genomic Order:  218
Name:  ? Potri.009G021800 Secondary Identifier:  ? PAC:26987404
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7560 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G021800 0.5kb upstream 0.5kb upstream 6909 true Chr09: 3359347-3366255 Populus trichocarpa
Potri.009G021800 0.5kb upstream 0.5kb upstream 500 false Chr09: 3359347-3359846 Populus trichocarpa
Potri.009G021800 0.5kb downstream 0.5kb downstream 6909 true Chr09: 3359847-3366755 Populus trichocarpa
Potri.009G021800 0.5kb downstream 0.5kb downstream 500 false Chr09: 3366256-3366755 Populus trichocarpa
Potri.009G021800 1.0kb upstream 1.0kb upstream 7409 true Chr09: 3358847-3366255 Populus trichocarpa
Potri.009G021800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3358847-3359846 Populus trichocarpa
Potri.009G021800 1.0kb downstream 1.0kb downstream 7409 true Chr09: 3359847-3367255 Populus trichocarpa
Potri.009G021800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3366256-3367255 Populus trichocarpa
Potri.009G021800 2.0kb upstream 2.0kb upstream 8409 true Chr09: 3357847-3366255 Populus trichocarpa
Potri.009G021800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3357847-3359846 Populus trichocarpa
Potri.009G021800 2.0kb downstream 2.0kb downstream 8409 true Chr09: 3359847-3368255 Populus trichocarpa
Potri.009G021800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3366256-3368255 Populus trichocarpa
Potri.009G021800 5.0kb upstream 5.0kb upstream 11409 true Chr09: 3354847-3366255 Populus trichocarpa
Potri.009G021800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3354847-3359846 Populus trichocarpa
Potri.009G021800 5.0kb downstream 5.0kb downstream 11409 true Chr09: 3359847-3371255 Populus trichocarpa
Potri.009G021800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3366256-3371255 Populus trichocarpa
Potri.009G021800 10.0kb upstream 10.0kb upstream 16409 true Chr09: 3349847-3366255 Populus trichocarpa
Potri.009G021800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3349847-3359846 Populus trichocarpa
Potri.009G021800 10.0kb downstream 10.0kb downstream 16409 true Chr09: 3359847-3376255 Populus trichocarpa
Potri.009G021800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3366256-3376255 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.134        
cufflinks 1.52        
cufflinks 1.307        
cufflinks 1.23        
cufflinks 0.679       Low
cufflinks 0.647       Low
cufflinks 2.011       High
cufflinks 1.161        
cufflinks 0.968        
cufflinks 1.819        
cufflinks 1.712        
cufflinks 1.944       High
cufflinks 1.377        
cufflinks 0.774        
cufflinks 0.612       Low
cufflinks 1.53        
cufflinks 2.118       High
cufflinks 0.719       Low
cufflinks 0.761       Low
cufflinks 1.161        
cufflinks 0.682       Low
cufflinks 3.435       High
cufflinks 1.26        
cufflinks 1.261        
cufflinks 1.697        
cufflinks 1.626        
cufflinks 2.717        
cufflinks 2.8        
cufflinks 3.342       High
cufflinks 0.805        

0 Strain