Gene : Potri.001G193000 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR18896//PTHR18896:SF63 - PHOSPHOLIPASE D // SUBFAMILY NOT NAMED Genomic Order:  1930
Name:  ? Potri.001G193000 Secondary Identifier:  ? PAC:27040301
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7039 Populus trichocarpa pathologic  
Ptrichocarpa LIPASYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3561 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G193000 0.5kb upstream 0.5kb upstream 6156 true Chr01: 17585937-17592092 Populus trichocarpa
Potri.001G193000 0.5kb upstream 0.5kb upstream 500 false Chr01: 17591593-17592092 Populus trichocarpa
Potri.001G193000 0.5kb downstream 0.5kb downstream 6156 true Chr01: 17585437-17591592 Populus trichocarpa
Potri.001G193000 0.5kb downstream 0.5kb downstream 500 false Chr01: 17585437-17585936 Populus trichocarpa
Potri.001G193000 1.0kb upstream 1.0kb upstream 6656 true Chr01: 17585937-17592592 Populus trichocarpa
Potri.001G193000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17591593-17592592 Populus trichocarpa
Potri.001G193000 1.0kb downstream 1.0kb downstream 6656 true Chr01: 17584937-17591592 Populus trichocarpa
Potri.001G193000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17584937-17585936 Populus trichocarpa
Potri.001G193000 2.0kb upstream 2.0kb upstream 7656 true Chr01: 17585937-17593592 Populus trichocarpa
Potri.001G193000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17591593-17593592 Populus trichocarpa
Potri.001G193000 2.0kb downstream 2.0kb downstream 7656 true Chr01: 17583937-17591592 Populus trichocarpa
Potri.001G193000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17583937-17585936 Populus trichocarpa
Potri.001G193000 5.0kb upstream 5.0kb upstream 10656 true Chr01: 17585937-17596592 Populus trichocarpa
Potri.001G193000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17591593-17596592 Populus trichocarpa
Potri.001G193000 5.0kb downstream 5.0kb downstream 10656 true Chr01: 17580937-17591592 Populus trichocarpa
Potri.001G193000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17580937-17585936 Populus trichocarpa
Potri.001G193000 10.0kb upstream 10.0kb upstream 15656 true Chr01: 17585937-17601592 Populus trichocarpa
Potri.001G193000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17591593-17601592 Populus trichocarpa
Potri.001G193000 10.0kb downstream 10.0kb downstream 15656 true Chr01: 17575937-17591592 Populus trichocarpa
Potri.001G193000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17575937-17585936 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.768     High  
cufflinks 25.784     High  
cufflinks 52.514     High  
cufflinks 17.101     High Low
cufflinks 63.45     High High
cufflinks 24.275     High Low
cufflinks 21.82     High Low
cufflinks 66.467     High High
cufflinks 28.039     High  
cufflinks 31.876     High  
cufflinks 53.345     High  
cufflinks 40.583     High  
cufflinks 27.178     High  
cufflinks 37.995     High  
cufflinks 31.152     High  
cufflinks 24.633     High Low
cufflinks 54.896     High  
cufflinks 65.218     High High
cufflinks 65.029     High High
cufflinks 23.256     High Low
cufflinks 45.265     High  
cufflinks 32.697     High  
cufflinks 49.001     High  
cufflinks 34.386     High  
cufflinks 172.683     High  
cufflinks 134.375     High  
cufflinks 121.299     High  
cufflinks 141.154     High  
cufflinks 114.062     High  
cufflinks 161.912     High  

0 Strain