Gene : Potri.011G145100 P. trichocarpa v3.0
Defline:  (1 of 2) K00384 - thioredoxin reductase (NADPH) (trxB) Genomic Order:  1451
Name:  ? Potri.011G145100 Secondary Identifier:  ? PAC:27003180
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa THIOREDOX-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G145100 0.5kb upstream 0.5kb upstream 3309 true Chr11: 16522819-16526127 Populus trichocarpa
Potri.011G145100 0.5kb upstream 0.5kb upstream 500 false Chr11: 16525628-16526127 Populus trichocarpa
Potri.011G145100 0.5kb downstream 0.5kb downstream 3309 true Chr11: 16522319-16525627 Populus trichocarpa
Potri.011G145100 0.5kb downstream 0.5kb downstream 500 false Chr11: 16522319-16522818 Populus trichocarpa
Potri.011G145100 1.0kb upstream 1.0kb upstream 3809 true Chr11: 16522819-16526627 Populus trichocarpa
Potri.011G145100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 16525628-16526627 Populus trichocarpa
Potri.011G145100 1.0kb downstream 1.0kb downstream 3809 true Chr11: 16521819-16525627 Populus trichocarpa
Potri.011G145100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16521819-16522818 Populus trichocarpa
Potri.011G145100 2.0kb upstream 2.0kb upstream 4809 true Chr11: 16522819-16527627 Populus trichocarpa
Potri.011G145100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 16525628-16527627 Populus trichocarpa
Potri.011G145100 2.0kb downstream 2.0kb downstream 4809 true Chr11: 16520819-16525627 Populus trichocarpa
Potri.011G145100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16520819-16522818 Populus trichocarpa
Potri.011G145100 5.0kb upstream 5.0kb upstream 7809 true Chr11: 16522819-16530627 Populus trichocarpa
Potri.011G145100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 16525628-16530627 Populus trichocarpa
Potri.011G145100 5.0kb downstream 5.0kb downstream 7809 true Chr11: 16517819-16525627 Populus trichocarpa
Potri.011G145100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16517819-16522818 Populus trichocarpa
Potri.011G145100 10.0kb upstream 10.0kb upstream 12809 true Chr11: 16522819-16535627 Populus trichocarpa
Potri.011G145100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 16525628-16535627 Populus trichocarpa
Potri.011G145100 10.0kb downstream 10.0kb downstream 12809 true Chr11: 16512819-16525627 Populus trichocarpa
Potri.011G145100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16512819-16522818 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.876        
cufflinks 0.625        
cufflinks 0.485        
cufflinks 0.985       High
cufflinks 0.233        
cufflinks 0.179     Low  
cufflinks 0.195        
cufflinks 0.631        
cufflinks 1.943       High
cufflinks 0.186        
cufflinks 0.261        
cufflinks 1.166       High
cufflinks 0.091     Low Low
cufflinks 0.259        
cufflinks 0.824        
cufflinks 0.315        
cufflinks 0.055     Low Low
cufflinks 0.184        
cufflinks 1.745       High
cufflinks 0.261        
cufflinks 0.262        
cufflinks 0.373        
cufflinks 0.269        
cufflinks 0.418        
cufflinks 0.04     Low Low
cufflinks 0.568        
cufflinks 1.802       High
cufflinks 0.04     Low Low
cufflinks 0.304     Low  
cufflinks 0.192     Low  

0 Strain