Gene : Potri.011G147500 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR21433//PTHR21433:SF4 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA // SUBFAMILY NOT NAMED Genomic Order:  1475
Name:  ? Potri.011G147500 Secondary Identifier:  ? PAC:27001606
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G147500 0.5kb upstream 0.5kb upstream 5090 true Chr11: 16684946-16690035 Populus trichocarpa
Potri.011G147500 0.5kb upstream 0.5kb upstream 500 false Chr11: 16689536-16690035 Populus trichocarpa
Potri.011G147500 0.5kb downstream 0.5kb downstream 5090 true Chr11: 16684446-16689535 Populus trichocarpa
Potri.011G147500 0.5kb downstream 0.5kb downstream 500 false Chr11: 16684446-16684945 Populus trichocarpa
Potri.011G147500 1.0kb upstream 1.0kb upstream 5590 true Chr11: 16684946-16690535 Populus trichocarpa
Potri.011G147500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 16689536-16690535 Populus trichocarpa
Potri.011G147500 1.0kb downstream 1.0kb downstream 5590 true Chr11: 16683946-16689535 Populus trichocarpa
Potri.011G147500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16683946-16684945 Populus trichocarpa
Potri.011G147500 2.0kb upstream 2.0kb upstream 6590 true Chr11: 16684946-16691535 Populus trichocarpa
Potri.011G147500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 16689536-16691535 Populus trichocarpa
Potri.011G147500 2.0kb downstream 2.0kb downstream 6590 true Chr11: 16682946-16689535 Populus trichocarpa
Potri.011G147500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16682946-16684945 Populus trichocarpa
Potri.011G147500 5.0kb upstream 5.0kb upstream 9590 true Chr11: 16684946-16694535 Populus trichocarpa
Potri.011G147500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 16689536-16694535 Populus trichocarpa
Potri.011G147500 5.0kb downstream 5.0kb downstream 9590 true Chr11: 16679946-16689535 Populus trichocarpa
Potri.011G147500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16679946-16684945 Populus trichocarpa
Potri.011G147500 10.0kb upstream 10.0kb upstream 14590 true Chr11: 16684946-16699535 Populus trichocarpa
Potri.011G147500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 16689536-16699535 Populus trichocarpa
Potri.011G147500 10.0kb downstream 10.0kb downstream 14590 true Chr11: 16674946-16689535 Populus trichocarpa
Potri.011G147500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16674946-16684945 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.725        
cufflinks 4.848        
cufflinks 4.681        
cufflinks 6.255        
cufflinks 4.257        
cufflinks 3.484       Low
cufflinks 8.632       High
cufflinks 5.154        
cufflinks 3.557       Low
cufflinks 6.255        
cufflinks 3.701       Low
cufflinks 6.024        
cufflinks 7.969       High
cufflinks 3.93       Low
cufflinks 6.608        
cufflinks 5.536        
cufflinks 3.282       Low
cufflinks 4.463        
cufflinks 6.803       High
cufflinks 5.39        
cufflinks 5.429        
cufflinks 4.635        
cufflinks 5.642        
cufflinks 5.27        
cufflinks 28.585     High  
cufflinks 33.833     High High
cufflinks 31.84     High  
cufflinks 37.089     High High
cufflinks 26.28        
cufflinks 31.24     High  

0 Strain