Gene : Potri.001G262600 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 Genomic Order:  2626
Name:  ? Potri.001G262600 Secondary Identifier:  ? PAC:27042661
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G262600 0.5kb upstream 0.5kb upstream 15729 true Chr01: 27146666-27162394 Populus trichocarpa
Potri.001G262600 0.5kb upstream 0.5kb upstream 500 false Chr01: 27161895-27162394 Populus trichocarpa
Potri.001G262600 0.5kb downstream 0.5kb downstream 15729 true Chr01: 27146166-27161894 Populus trichocarpa
Potri.001G262600 0.5kb downstream 0.5kb downstream 500 false Chr01: 27146166-27146665 Populus trichocarpa
Potri.001G262600 1.0kb upstream 1.0kb upstream 16229 true Chr01: 27146666-27162894 Populus trichocarpa
Potri.001G262600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 27161895-27162894 Populus trichocarpa
Potri.001G262600 1.0kb downstream 1.0kb downstream 16229 true Chr01: 27145666-27161894 Populus trichocarpa
Potri.001G262600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 27145666-27146665 Populus trichocarpa
Potri.001G262600 2.0kb upstream 2.0kb upstream 17229 true Chr01: 27146666-27163894 Populus trichocarpa
Potri.001G262600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 27161895-27163894 Populus trichocarpa
Potri.001G262600 2.0kb downstream 2.0kb downstream 17229 true Chr01: 27144666-27161894 Populus trichocarpa
Potri.001G262600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 27144666-27146665 Populus trichocarpa
Potri.001G262600 5.0kb upstream 5.0kb upstream 20229 true Chr01: 27146666-27166894 Populus trichocarpa
Potri.001G262600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 27161895-27166894 Populus trichocarpa
Potri.001G262600 5.0kb downstream 5.0kb downstream 20229 true Chr01: 27141666-27161894 Populus trichocarpa
Potri.001G262600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 27141666-27146665 Populus trichocarpa
Potri.001G262600 10.0kb upstream 10.0kb upstream 25229 true Chr01: 27146666-27171894 Populus trichocarpa
Potri.001G262600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 27161895-27171894 Populus trichocarpa
Potri.001G262600 10.0kb downstream 10.0kb downstream 25229 true Chr01: 27136666-27161894 Populus trichocarpa
Potri.001G262600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 27136666-27146665 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.458       Low
cufflinks 0.826        
cufflinks 0.66        
cufflinks 1.878       High
cufflinks 0.529        
cufflinks 0.756        
cufflinks 1.518       High
cufflinks 0.549        
cufflinks 0.773        
cufflinks 0.418       Low
cufflinks 0.741        
cufflinks 1.132        
cufflinks 0.423       Low
cufflinks 0.956        
cufflinks 1.22       High
cufflinks 0.724        
cufflinks 0.673        
cufflinks 0.874        
cufflinks 0.727        
cufflinks 0.633        
cufflinks 1.511       High
cufflinks 0.319       Low
cufflinks 0.791        
cufflinks 0.63        
cufflinks 8.053        
cufflinks 8.273        
cufflinks 8.383        
cufflinks 11.403       High
cufflinks 9.528        
cufflinks 8.201        

0 Strain