Gene : Potri.001G317500 P. trichocarpa v3.0
Defline:  (1 of 3) K01874 - methionyl-tRNA synthetase (MARS, metG) Genomic Order:  3175
Name:  ? Potri.001G317500 Secondary Identifier:  ? PAC:27041589
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G317500 0.5kb upstream 0.5kb upstream 6770 true Chr01: 32253978-32260747 Populus trichocarpa
Potri.001G317500 0.5kb upstream 0.5kb upstream 500 false Chr01: 32260248-32260747 Populus trichocarpa
Potri.001G317500 0.5kb downstream 0.5kb downstream 6770 true Chr01: 32253478-32260247 Populus trichocarpa
Potri.001G317500 0.5kb downstream 0.5kb downstream 500 false Chr01: 32253478-32253977 Populus trichocarpa
Potri.001G317500 1.0kb upstream 1.0kb upstream 7270 true Chr01: 32253978-32261247 Populus trichocarpa
Potri.001G317500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 32260248-32261247 Populus trichocarpa
Potri.001G317500 1.0kb downstream 1.0kb downstream 7270 true Chr01: 32252978-32260247 Populus trichocarpa
Potri.001G317500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 32252978-32253977 Populus trichocarpa
Potri.001G317500 2.0kb upstream 2.0kb upstream 8270 true Chr01: 32253978-32262247 Populus trichocarpa
Potri.001G317500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 32260248-32262247 Populus trichocarpa
Potri.001G317500 2.0kb downstream 2.0kb downstream 8270 true Chr01: 32251978-32260247 Populus trichocarpa
Potri.001G317500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 32251978-32253977 Populus trichocarpa
Potri.001G317500 5.0kb upstream 5.0kb upstream 11270 true Chr01: 32253978-32265247 Populus trichocarpa
Potri.001G317500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 32260248-32265247 Populus trichocarpa
Potri.001G317500 5.0kb downstream 5.0kb downstream 11270 true Chr01: 32248978-32260247 Populus trichocarpa
Potri.001G317500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 32248978-32253977 Populus trichocarpa
Potri.001G317500 10.0kb upstream 10.0kb upstream 16270 true Chr01: 32253978-32270247 Populus trichocarpa
Potri.001G317500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 32260248-32270247 Populus trichocarpa
Potri.001G317500 10.0kb downstream 10.0kb downstream 16270 true Chr01: 32243978-32260247 Populus trichocarpa
Potri.001G317500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 32243978-32253977 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.331       Low
cufflinks 1.795        
cufflinks 1.664        
cufflinks 1.791        
cufflinks 2.102        
cufflinks 2.497        
cufflinks 1.269       Low
cufflinks 3.063       High
cufflinks 1.855        
cufflinks 2.057        
cufflinks 3.23       High
cufflinks 4.464       High
cufflinks 3.139       High
cufflinks 2.225        
cufflinks 2.924        
cufflinks 2.285        
cufflinks 2.568        
cufflinks 1.472       Low
cufflinks 3.392       High
cufflinks 1.687        
cufflinks 1.419       Low
cufflinks 2.414        
cufflinks 1.921        
cufflinks 2.08        
cufflinks 2.118        
cufflinks 14.819        
cufflinks 21.62        
cufflinks 25.708       High
cufflinks 20.301        
cufflinks 19.155        

0 Strain