Gene : Potri.002G009600 P. trichocarpa v3.0
Defline:  (1 of 3) K12385 - Niemann-Pick C1 protein (NPC1) Genomic Order:  96
Name:  ? Potri.002G009600 Secondary Identifier:  ? PAC:27020016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G009600 0.5kb upstream 0.5kb upstream 15078 true Chr02: 544416-559493 Populus trichocarpa
Potri.002G009600 0.5kb upstream 0.5kb upstream 500 false Chr02: 544416-544915 Populus trichocarpa
Potri.002G009600 0.5kb downstream 0.5kb downstream 15078 true Chr02: 544916-559993 Populus trichocarpa
Potri.002G009600 0.5kb downstream 0.5kb downstream 500 false Chr02: 559494-559993 Populus trichocarpa
Potri.002G009600 1.0kb upstream 1.0kb upstream 15578 true Chr02: 543916-559493 Populus trichocarpa
Potri.002G009600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 543916-544915 Populus trichocarpa
Potri.002G009600 1.0kb downstream 1.0kb downstream 15578 true Chr02: 544916-560493 Populus trichocarpa
Potri.002G009600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 559494-560493 Populus trichocarpa
Potri.002G009600 2.0kb upstream 2.0kb upstream 16578 true Chr02: 542916-559493 Populus trichocarpa
Potri.002G009600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 542916-544915 Populus trichocarpa
Potri.002G009600 2.0kb downstream 2.0kb downstream 16578 true Chr02: 544916-561493 Populus trichocarpa
Potri.002G009600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 559494-561493 Populus trichocarpa
Potri.002G009600 5.0kb upstream 5.0kb upstream 19578 true Chr02: 539916-559493 Populus trichocarpa
Potri.002G009600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 539916-544915 Populus trichocarpa
Potri.002G009600 5.0kb downstream 5.0kb downstream 19578 true Chr02: 544916-564493 Populus trichocarpa
Potri.002G009600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 559494-564493 Populus trichocarpa
Potri.002G009600 10.0kb upstream 10.0kb upstream 24578 true Chr02: 534916-559493 Populus trichocarpa
Potri.002G009600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 534916-544915 Populus trichocarpa
Potri.002G009600 10.0kb downstream 10.0kb downstream 24578 true Chr02: 544916-569493 Populus trichocarpa
Potri.002G009600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 559494-569493 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.686        
cufflinks 0.711        
cufflinks 0.523        
cufflinks 0.392        
cufflinks 0.619        
cufflinks 0.438        
cufflinks 0.473        
cufflinks 0.793       High
cufflinks 0.671        
cufflinks 0.314       Low
cufflinks 1.144       High
cufflinks 1.128       High
cufflinks 0.528        
cufflinks 0.572        
cufflinks 0.49        
cufflinks 0.5        
cufflinks 0.238       Low
cufflinks 0.279       Low
cufflinks 0.272       Low
cufflinks 0.69        
cufflinks 0.673        
cufflinks 0.621        
cufflinks 0.426        
cufflinks 0.268       Low
cufflinks 22.905        
cufflinks 13.751        
cufflinks 7.263       Low
cufflinks 19.236        
cufflinks 10.2        
cufflinks 28.777     High  

0 Strain