Gene : Potri.002G091500 P. trichocarpa v3.0
Defline:  (1 of 4) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  915
Name:  ? Potri.002G091500 Secondary Identifier:  ? PAC:27021955
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-724 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5097 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G091500 0.5kb upstream 0.5kb upstream 4706 true Chr02: 6509754-6514459 Populus trichocarpa
Potri.002G091500 0.5kb upstream 0.5kb upstream 500 false Chr02: 6509754-6510253 Populus trichocarpa
Potri.002G091500 0.5kb downstream 0.5kb downstream 4706 true Chr02: 6510254-6514959 Populus trichocarpa
Potri.002G091500 0.5kb downstream 0.5kb downstream 500 false Chr02: 6514460-6514959 Populus trichocarpa
Potri.002G091500 1.0kb upstream 1.0kb upstream 5206 true Chr02: 6509254-6514459 Populus trichocarpa
Potri.002G091500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6509254-6510253 Populus trichocarpa
Potri.002G091500 1.0kb downstream 1.0kb downstream 5206 true Chr02: 6510254-6515459 Populus trichocarpa
Potri.002G091500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6514460-6515459 Populus trichocarpa
Potri.002G091500 2.0kb upstream 2.0kb upstream 6206 true Chr02: 6508254-6514459 Populus trichocarpa
Potri.002G091500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6508254-6510253 Populus trichocarpa
Potri.002G091500 2.0kb downstream 2.0kb downstream 6206 true Chr02: 6510254-6516459 Populus trichocarpa
Potri.002G091500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6514460-6516459 Populus trichocarpa
Potri.002G091500 5.0kb upstream 5.0kb upstream 9206 true Chr02: 6505254-6514459 Populus trichocarpa
Potri.002G091500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6505254-6510253 Populus trichocarpa
Potri.002G091500 5.0kb downstream 5.0kb downstream 9206 true Chr02: 6510254-6519459 Populus trichocarpa
Potri.002G091500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6514460-6519459 Populus trichocarpa
Potri.002G091500 10.0kb upstream 10.0kb upstream 14206 true Chr02: 6500254-6514459 Populus trichocarpa
Potri.002G091500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6500254-6510253 Populus trichocarpa
Potri.002G091500 10.0kb downstream 10.0kb downstream 14206 true Chr02: 6510254-6524459 Populus trichocarpa
Potri.002G091500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6514460-6524459 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.001     Low Low
cufflinks 0.011     Low  
cufflinks 0.019     Low  
cufflinks 0.001     Low Low
cufflinks 0.003     Low  
cufflinks 0.404       High
cufflinks 0.002     Low  
cufflinks 0.001     Low Low
cufflinks 0.002     Low  
cufflinks 0.013     Low  
cufflinks 0.012     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.048     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.445       High
cufflinks 0.006     Low  
cufflinks 0.001     Low Low
cufflinks 0.009     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.104     Low  
cufflinks 0.077     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain