Gene : Potri.002G143900 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR10783//PTHR10783:SF26 - XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED // SPX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  1439
Name:  ? Potri.002G143900 Secondary Identifier:  ? PAC:27021472
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G143900 0.5kb upstream 0.5kb upstream 2513 true Chr02: 10714624-10717136 Populus trichocarpa
Potri.002G143900 0.5kb upstream 0.5kb upstream 500 false Chr02: 10714624-10715123 Populus trichocarpa
Potri.002G143900 0.5kb downstream 0.5kb downstream 2513 true Chr02: 10715124-10717636 Populus trichocarpa
Potri.002G143900 0.5kb downstream 0.5kb downstream 500 false Chr02: 10717137-10717636 Populus trichocarpa
Potri.002G143900 1.0kb upstream 1.0kb upstream 3013 true Chr02: 10714124-10717136 Populus trichocarpa
Potri.002G143900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10714124-10715123 Populus trichocarpa
Potri.002G143900 1.0kb downstream 1.0kb downstream 3013 true Chr02: 10715124-10718136 Populus trichocarpa
Potri.002G143900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10717137-10718136 Populus trichocarpa
Potri.002G143900 2.0kb upstream 2.0kb upstream 4013 true Chr02: 10713124-10717136 Populus trichocarpa
Potri.002G143900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10713124-10715123 Populus trichocarpa
Potri.002G143900 2.0kb downstream 2.0kb downstream 4013 true Chr02: 10715124-10719136 Populus trichocarpa
Potri.002G143900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10717137-10719136 Populus trichocarpa
Potri.002G143900 5.0kb upstream 5.0kb upstream 7013 true Chr02: 10710124-10717136 Populus trichocarpa
Potri.002G143900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10710124-10715123 Populus trichocarpa
Potri.002G143900 5.0kb downstream 5.0kb downstream 7013 true Chr02: 10715124-10722136 Populus trichocarpa
Potri.002G143900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10717137-10722136 Populus trichocarpa
Potri.002G143900 10.0kb upstream 10.0kb upstream 12013 true Chr02: 10705124-10717136 Populus trichocarpa
Potri.002G143900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10705124-10715123 Populus trichocarpa
Potri.002G143900 10.0kb downstream 10.0kb downstream 12013 true Chr02: 10715124-10727136 Populus trichocarpa
Potri.002G143900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10717137-10727136 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low  
cufflinks 0.041     Low  
cufflinks 0.072     Low  
cufflinks 0.045     Low  
cufflinks 0.042     Low  
cufflinks 0.033     Low  
cufflinks 0.028     Low  
cufflinks 0.092     Low  
cufflinks 0.252       High
cufflinks 0.052     Low  
cufflinks 0.13       High
cufflinks 0.035     Low  
cufflinks 0.006     Low Low
cufflinks 0.049     Low  
cufflinks 0.044     Low  
cufflinks 0.102     Low  
cufflinks 0.027     Low  
cufflinks 0.045     Low  
cufflinks 0.174       High
cufflinks 0.059     Low  
cufflinks 0.025     Low  
cufflinks 0.01     Low Low
cufflinks 0.044     Low  
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain