Gene : Potri.001G417400 P. trichocarpa v3.0
Defline:  (1 of 219) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  4174
Name:  ? Potri.001G417400 Secondary Identifier:  ? PAC:27044812
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G417400 0.5kb upstream 0.5kb upstream 8309 true Chr01: 44240424-44248732 Populus trichocarpa
Potri.001G417400 0.5kb upstream 0.5kb upstream 500 false Chr01: 44248233-44248732 Populus trichocarpa
Potri.001G417400 0.5kb downstream 0.5kb downstream 8309 true Chr01: 44239924-44248232 Populus trichocarpa
Potri.001G417400 0.5kb downstream 0.5kb downstream 500 false Chr01: 44239924-44240423 Populus trichocarpa
Potri.001G417400 1.0kb upstream 1.0kb upstream 8809 true Chr01: 44240424-44249232 Populus trichocarpa
Potri.001G417400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44248233-44249232 Populus trichocarpa
Potri.001G417400 1.0kb downstream 1.0kb downstream 8809 true Chr01: 44239424-44248232 Populus trichocarpa
Potri.001G417400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44239424-44240423 Populus trichocarpa
Potri.001G417400 2.0kb upstream 2.0kb upstream 9809 true Chr01: 44240424-44250232 Populus trichocarpa
Potri.001G417400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44248233-44250232 Populus trichocarpa
Potri.001G417400 2.0kb downstream 2.0kb downstream 9809 true Chr01: 44238424-44248232 Populus trichocarpa
Potri.001G417400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44238424-44240423 Populus trichocarpa
Potri.001G417400 5.0kb upstream 5.0kb upstream 12809 true Chr01: 44240424-44253232 Populus trichocarpa
Potri.001G417400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44248233-44253232 Populus trichocarpa
Potri.001G417400 5.0kb downstream 5.0kb downstream 12809 true Chr01: 44235424-44248232 Populus trichocarpa
Potri.001G417400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44235424-44240423 Populus trichocarpa
Potri.001G417400 10.0kb upstream 10.0kb upstream 17809 true Chr01: 44240424-44258232 Populus trichocarpa
Potri.001G417400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44248233-44258232 Populus trichocarpa
Potri.001G417400 10.0kb downstream 10.0kb downstream 17809 true Chr01: 44230424-44248232 Populus trichocarpa
Potri.001G417400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44230424-44240423 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.311       Low
cufflinks 0.46        
cufflinks 0.959        
cufflinks 0.623        
cufflinks 0.255       Low
cufflinks 1.38       High
cufflinks 0.26       Low
cufflinks 0.462        
cufflinks 1.096        
cufflinks 0.613        
cufflinks 0.795        
cufflinks 1.189        
cufflinks 0.895        
cufflinks 0.446        
cufflinks 0.7        
cufflinks 0.222       Low
cufflinks 2.345       High
cufflinks 0.259       Low
cufflinks 1.425       High
cufflinks 0.986        
cufflinks 0.601        
cufflinks 1.187        
cufflinks 1.138        
cufflinks 0.782        
cufflinks 5.158        
cufflinks 8.27        
cufflinks 6.132        
cufflinks 10.761       High
cufflinks 7.618        
cufflinks 8.109        

0 Strain