Gene : Potri.002G238300 P. trichocarpa v3.0
Defline:  (1 of 1) 3.5.2.17//4.1.1.97 - Hydroxyisourate hydrolase / HIUHase // 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase / OHCU decarboxylase Genomic Order:  2383
Name:  ? Potri.002G238300 Secondary Identifier:  ? PAC:27022691
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5691 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G238300 0.5kb upstream 0.5kb upstream 3471 true Chr02: 23115410-23118880 Populus trichocarpa
Potri.002G238300 0.5kb upstream 0.5kb upstream 500 false Chr02: 23115410-23115909 Populus trichocarpa
Potri.002G238300 0.5kb downstream 0.5kb downstream 3471 true Chr02: 23115910-23119380 Populus trichocarpa
Potri.002G238300 0.5kb downstream 0.5kb downstream 500 false Chr02: 23118881-23119380 Populus trichocarpa
Potri.002G238300 1.0kb upstream 1.0kb upstream 3971 true Chr02: 23114910-23118880 Populus trichocarpa
Potri.002G238300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 23114910-23115909 Populus trichocarpa
Potri.002G238300 1.0kb downstream 1.0kb downstream 3971 true Chr02: 23115910-23119880 Populus trichocarpa
Potri.002G238300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 23118881-23119880 Populus trichocarpa
Potri.002G238300 2.0kb upstream 2.0kb upstream 4971 true Chr02: 23113910-23118880 Populus trichocarpa
Potri.002G238300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 23113910-23115909 Populus trichocarpa
Potri.002G238300 2.0kb downstream 2.0kb downstream 4971 true Chr02: 23115910-23120880 Populus trichocarpa
Potri.002G238300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 23118881-23120880 Populus trichocarpa
Potri.002G238300 5.0kb upstream 5.0kb upstream 7971 true Chr02: 23110910-23118880 Populus trichocarpa
Potri.002G238300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 23110910-23115909 Populus trichocarpa
Potri.002G238300 5.0kb downstream 5.0kb downstream 7971 true Chr02: 23115910-23123880 Populus trichocarpa
Potri.002G238300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 23118881-23123880 Populus trichocarpa
Potri.002G238300 10.0kb upstream 10.0kb upstream 12971 true Chr02: 23105910-23118880 Populus trichocarpa
Potri.002G238300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 23105910-23115909 Populus trichocarpa
Potri.002G238300 10.0kb downstream 10.0kb downstream 12971 true Chr02: 23115910-23128880 Populus trichocarpa
Potri.002G238300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 23118881-23128880 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.415        
cufflinks 3.857        
cufflinks 4.323        
cufflinks 5.446       High
cufflinks 4.559        
cufflinks 7.948       High
cufflinks 6.21       High
cufflinks 4.854        
cufflinks 4.158        
cufflinks 3.633        
cufflinks 4.139        
cufflinks 3.27       Low
cufflinks 3.374       Low
cufflinks 4.555        
cufflinks 4.286        
cufflinks 3.252       Low
cufflinks 3.878        
cufflinks 3.501        
cufflinks 3.93        
cufflinks 3.873        
cufflinks 5.064        
cufflinks 3.582        
cufflinks 3.7        
cufflinks 3.948        
cufflinks 51.36     High High
cufflinks 38.685     High  
cufflinks 34.26     High  
cufflinks 50.203     High High
cufflinks 42.339     High  
cufflinks 39.909     High  

0 Strain