Gene : Potri.002G007200 P. trichocarpa v3.0
Defline:  (1 of 3) K08852 - serine/threonine-protein kinase/endoribonuclease IRE1 (ERN1) Genomic Order:  72
Name:  ? Potri.002G007200 Secondary Identifier:  ? PAC:27022830
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G007200 0.5kb upstream 0.5kb upstream 3390 true Chr02: 388139-391528 Populus trichocarpa
Potri.002G007200 0.5kb upstream 0.5kb upstream 500 false Chr02: 388139-388638 Populus trichocarpa
Potri.002G007200 0.5kb downstream 0.5kb downstream 3390 true Chr02: 388639-392028 Populus trichocarpa
Potri.002G007200 0.5kb downstream 0.5kb downstream 500 false Chr02: 391529-392028 Populus trichocarpa
Potri.002G007200 1.0kb upstream 1.0kb upstream 3890 true Chr02: 387639-391528 Populus trichocarpa
Potri.002G007200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 387639-388638 Populus trichocarpa
Potri.002G007200 1.0kb downstream 1.0kb downstream 3890 true Chr02: 388639-392528 Populus trichocarpa
Potri.002G007200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 391529-392528 Populus trichocarpa
Potri.002G007200 2.0kb upstream 2.0kb upstream 4890 true Chr02: 386639-391528 Populus trichocarpa
Potri.002G007200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 386639-388638 Populus trichocarpa
Potri.002G007200 2.0kb downstream 2.0kb downstream 4890 true Chr02: 388639-393528 Populus trichocarpa
Potri.002G007200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 391529-393528 Populus trichocarpa
Potri.002G007200 5.0kb upstream 5.0kb upstream 7890 true Chr02: 383639-391528 Populus trichocarpa
Potri.002G007200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 383639-388638 Populus trichocarpa
Potri.002G007200 5.0kb downstream 5.0kb downstream 7890 true Chr02: 388639-396528 Populus trichocarpa
Potri.002G007200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 391529-396528 Populus trichocarpa
Potri.002G007200 10.0kb upstream 10.0kb upstream 12890 true Chr02: 378639-391528 Populus trichocarpa
Potri.002G007200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 378639-388638 Populus trichocarpa
Potri.002G007200 10.0kb downstream 10.0kb downstream 12890 true Chr02: 388639-401528 Populus trichocarpa
Potri.002G007200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 391529-401528 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.343        
cufflinks 0.312        
cufflinks 0.233       Low
cufflinks 0.631        
cufflinks 1.154        
cufflinks 2.026       High
cufflinks 1.727       High
cufflinks 0.51        
cufflinks 1.537       High
cufflinks 0.575        
cufflinks 2.456       High
cufflinks 0.436        
cufflinks 0.282       Low
cufflinks 0.602        
cufflinks 0.338        
cufflinks 0.432        
cufflinks 0.262       Low
cufflinks 0.431        
cufflinks 0.227       Low
cufflinks 1.474       High
cufflinks 0.417        
cufflinks 0.334        
cufflinks 0.416        
cufflinks 0.902        
cufflinks 0.443        
cufflinks 9.438        
cufflinks 8.889        
cufflinks 12.607       High
cufflinks 9.566        
cufflinks 9.533        

0 Strain