Gene : Potri.009G047700 P. trichocarpa v3.0
Defline:  (1 of 2) 2.6.1.45 - Serine--glyoxylate transaminase / SGAT Genomic Order:  477
Name:  ? Potri.009G047700 Secondary Identifier:  ? PAC:26987331
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLYSYN-ALA-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G047700 0.5kb upstream 0.5kb upstream 5499 true Chr09: 5298326-5303824 Populus trichocarpa
Potri.009G047700 0.5kb upstream 0.5kb upstream 500 false Chr09: 5303325-5303824 Populus trichocarpa
Potri.009G047700 0.5kb downstream 0.5kb downstream 5499 true Chr09: 5297826-5303324 Populus trichocarpa
Potri.009G047700 0.5kb downstream 0.5kb downstream 500 false Chr09: 5297826-5298325 Populus trichocarpa
Potri.009G047700 1.0kb upstream 1.0kb upstream 5999 true Chr09: 5298326-5304324 Populus trichocarpa
Potri.009G047700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5303325-5304324 Populus trichocarpa
Potri.009G047700 1.0kb downstream 1.0kb downstream 5999 true Chr09: 5297326-5303324 Populus trichocarpa
Potri.009G047700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5297326-5298325 Populus trichocarpa
Potri.009G047700 2.0kb upstream 2.0kb upstream 6999 true Chr09: 5298326-5305324 Populus trichocarpa
Potri.009G047700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5303325-5305324 Populus trichocarpa
Potri.009G047700 2.0kb downstream 2.0kb downstream 6999 true Chr09: 5296326-5303324 Populus trichocarpa
Potri.009G047700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5296326-5298325 Populus trichocarpa
Potri.009G047700 5.0kb upstream 5.0kb upstream 9999 true Chr09: 5298326-5308324 Populus trichocarpa
Potri.009G047700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5303325-5308324 Populus trichocarpa
Potri.009G047700 5.0kb downstream 5.0kb downstream 9999 true Chr09: 5293326-5303324 Populus trichocarpa
Potri.009G047700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5293326-5298325 Populus trichocarpa
Potri.009G047700 10.0kb upstream 10.0kb upstream 14999 true Chr09: 5298326-5313324 Populus trichocarpa
Potri.009G047700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5303325-5313324 Populus trichocarpa
Potri.009G047700 10.0kb downstream 10.0kb downstream 14999 true Chr09: 5288326-5303324 Populus trichocarpa
Potri.009G047700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5288326-5298325 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.078       Low
cufflinks 26.922     High High
cufflinks 1.049       Low
cufflinks 25.264     High High
cufflinks 61.131     High High
cufflinks 6.36        
cufflinks 2.935        
cufflinks 45.881     High High
cufflinks 2.964        
cufflinks 1.75       Low
cufflinks 10.146     High  
cufflinks 6.919        
cufflinks 2.661        
cufflinks 43.217     High High
cufflinks 7.59        
cufflinks 2.713        
cufflinks 3.28        
cufflinks 6.975        
cufflinks 3.909        
cufflinks 5.172        
cufflinks 14.232     High  
cufflinks 4.683        
cufflinks 9.83     High  
cufflinks 2.777        
cufflinks 109.583     High  
cufflinks 177.161     High High
cufflinks 161.652     High  
cufflinks 151.54     High  
cufflinks 88.845     High  
cufflinks 102.873     High  

0 Strain