Gene : Potri.002G119100 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR12354//PTHR12354:SF1 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR // PROTEIN F58B3.6 Genomic Order:  1191
Name:  ? Potri.002G119100 Secondary Identifier:  ? PAC:27021655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G119100 0.5kb upstream 0.5kb upstream 5011 true Chr02: 8932093-8937103 Populus trichocarpa
Potri.002G119100 0.5kb upstream 0.5kb upstream 500 false Chr02: 8932093-8932592 Populus trichocarpa
Potri.002G119100 0.5kb downstream 0.5kb downstream 5011 true Chr02: 8932593-8937603 Populus trichocarpa
Potri.002G119100 0.5kb downstream 0.5kb downstream 500 false Chr02: 8937104-8937603 Populus trichocarpa
Potri.002G119100 1.0kb upstream 1.0kb upstream 5511 true Chr02: 8931593-8937103 Populus trichocarpa
Potri.002G119100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 8931593-8932592 Populus trichocarpa
Potri.002G119100 1.0kb downstream 1.0kb downstream 5511 true Chr02: 8932593-8938103 Populus trichocarpa
Potri.002G119100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 8937104-8938103 Populus trichocarpa
Potri.002G119100 2.0kb upstream 2.0kb upstream 6511 true Chr02: 8930593-8937103 Populus trichocarpa
Potri.002G119100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 8930593-8932592 Populus trichocarpa
Potri.002G119100 2.0kb downstream 2.0kb downstream 6511 true Chr02: 8932593-8939103 Populus trichocarpa
Potri.002G119100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 8937104-8939103 Populus trichocarpa
Potri.002G119100 5.0kb upstream 5.0kb upstream 9511 true Chr02: 8927593-8937103 Populus trichocarpa
Potri.002G119100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 8927593-8932592 Populus trichocarpa
Potri.002G119100 5.0kb downstream 5.0kb downstream 9511 true Chr02: 8932593-8942103 Populus trichocarpa
Potri.002G119100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 8937104-8942103 Populus trichocarpa
Potri.002G119100 10.0kb upstream 10.0kb upstream 14511 true Chr02: 8922593-8937103 Populus trichocarpa
Potri.002G119100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 8922593-8932592 Populus trichocarpa
Potri.002G119100 10.0kb downstream 10.0kb downstream 14511 true Chr02: 8932593-8947103 Populus trichocarpa
Potri.002G119100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 8937104-8947103 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.722       High
cufflinks 3.361        
cufflinks 5.101       High
cufflinks 3.936        
cufflinks 3.87        
cufflinks 2.95        
cufflinks 2.121       Low
cufflinks 5.215       High
cufflinks 3.922        
cufflinks 3.237        
cufflinks 4.084        
cufflinks 4.227        
cufflinks 2.096       Low
cufflinks 4.169        
cufflinks 1.968       Low
cufflinks 3.639        
cufflinks 2.627       Low
cufflinks 4.679        
cufflinks 3.913        
cufflinks 3.749        
cufflinks 5.7       High
cufflinks 2.609       Low
cufflinks 4.074        
cufflinks 2.994        
cufflinks 40.313     High High
cufflinks 13.887        
cufflinks 12.102       Low
cufflinks 15.708        
cufflinks 14.803        
cufflinks 29.744     High  

0 Strain