Gene : Potri.002G212400 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR37236//PTHR37236:SF1 - FAMILY NOT NAMED // AUXIN-BINDING PROTEIN 1 Genomic Order:  2124
Name:  ? Potri.002G212400 Secondary Identifier:  ? PAC:27020579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G212400 0.5kb upstream 0.5kb upstream 4214 true Chr02: 19000937-19005150 Populus trichocarpa
Potri.002G212400 0.5kb upstream 0.5kb upstream 500 false Chr02: 19000937-19001436 Populus trichocarpa
Potri.002G212400 0.5kb downstream 0.5kb downstream 4214 true Chr02: 19001437-19005650 Populus trichocarpa
Potri.002G212400 0.5kb downstream 0.5kb downstream 500 false Chr02: 19005151-19005650 Populus trichocarpa
Potri.002G212400 1.0kb upstream 1.0kb upstream 4714 true Chr02: 19000437-19005150 Populus trichocarpa
Potri.002G212400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 19000437-19001436 Populus trichocarpa
Potri.002G212400 1.0kb downstream 1.0kb downstream 4714 true Chr02: 19001437-19006150 Populus trichocarpa
Potri.002G212400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 19005151-19006150 Populus trichocarpa
Potri.002G212400 2.0kb upstream 2.0kb upstream 5714 true Chr02: 18999437-19005150 Populus trichocarpa
Potri.002G212400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 18999437-19001436 Populus trichocarpa
Potri.002G212400 2.0kb downstream 2.0kb downstream 5714 true Chr02: 19001437-19007150 Populus trichocarpa
Potri.002G212400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 19005151-19007150 Populus trichocarpa
Potri.002G212400 5.0kb upstream 5.0kb upstream 8714 true Chr02: 18996437-19005150 Populus trichocarpa
Potri.002G212400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 18996437-19001436 Populus trichocarpa
Potri.002G212400 5.0kb downstream 5.0kb downstream 8714 true Chr02: 19001437-19010150 Populus trichocarpa
Potri.002G212400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 19005151-19010150 Populus trichocarpa
Potri.002G212400 10.0kb upstream 10.0kb upstream 13714 true Chr02: 18991437-19005150 Populus trichocarpa
Potri.002G212400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 18991437-19001436 Populus trichocarpa
Potri.002G212400 10.0kb downstream 10.0kb downstream 13714 true Chr02: 19001437-19015150 Populus trichocarpa
Potri.002G212400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 19005151-19015150 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.849        
cufflinks 2.447       High
cufflinks 1.339       Low
cufflinks 1.885        
cufflinks 2.58       High
cufflinks 2.07        
cufflinks 1.795        
cufflinks 2.269       High
cufflinks 1.493       Low
cufflinks 1.871        
cufflinks 1.82        
cufflinks 2.12        
cufflinks 1.821        
cufflinks 1.292       Low
cufflinks 1.97        
cufflinks 2.037        
cufflinks 1.812        
cufflinks 2.039        
cufflinks 1.386       Low
cufflinks 1.835        
cufflinks 1.885        
cufflinks 1.85        
cufflinks 1.784        
cufflinks 1.648        
cufflinks 8.189        
cufflinks 7.8        
cufflinks 6.71        
cufflinks 9.892       High
cufflinks 9.498       High
cufflinks 7.53        

0 Strain