Gene : Potri.002G164600 P. trichocarpa v3.0
Defline:  (1 of 2) 2.1.2.11 - 3-methyl-2-oxobutanoate hydroxymethyltransferase / Ketopantoate hydroxymethyltransferase Genomic Order:  1646
Name:  ? Potri.002G164600 Secondary Identifier:  ? PAC:27020399
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PANTO-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G164600 0.5kb upstream 0.5kb upstream 1927 true Chr02: 12426276-12428202 Populus trichocarpa
Potri.002G164600 0.5kb upstream 0.5kb upstream 500 false Chr02: 12427703-12428202 Populus trichocarpa
Potri.002G164600 0.5kb downstream 0.5kb downstream 1927 true Chr02: 12425776-12427702 Populus trichocarpa
Potri.002G164600 0.5kb downstream 0.5kb downstream 500 false Chr02: 12425776-12426275 Populus trichocarpa
Potri.002G164600 1.0kb upstream 1.0kb upstream 2427 true Chr02: 12426276-12428702 Populus trichocarpa
Potri.002G164600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12427703-12428702 Populus trichocarpa
Potri.002G164600 1.0kb downstream 1.0kb downstream 2427 true Chr02: 12425276-12427702 Populus trichocarpa
Potri.002G164600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12425276-12426275 Populus trichocarpa
Potri.002G164600 2.0kb upstream 2.0kb upstream 3427 true Chr02: 12426276-12429702 Populus trichocarpa
Potri.002G164600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12427703-12429702 Populus trichocarpa
Potri.002G164600 2.0kb downstream 2.0kb downstream 3427 true Chr02: 12424276-12427702 Populus trichocarpa
Potri.002G164600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12424276-12426275 Populus trichocarpa
Potri.002G164600 5.0kb upstream 5.0kb upstream 6427 true Chr02: 12426276-12432702 Populus trichocarpa
Potri.002G164600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12427703-12432702 Populus trichocarpa
Potri.002G164600 5.0kb downstream 5.0kb downstream 6427 true Chr02: 12421276-12427702 Populus trichocarpa
Potri.002G164600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12421276-12426275 Populus trichocarpa
Potri.002G164600 10.0kb upstream 10.0kb upstream 11427 true Chr02: 12426276-12437702 Populus trichocarpa
Potri.002G164600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12427703-12437702 Populus trichocarpa
Potri.002G164600 10.0kb downstream 10.0kb downstream 11427 true Chr02: 12416276-12427702 Populus trichocarpa
Potri.002G164600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12416276-12426275 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.654       High
cufflinks 0.582        
cufflinks 0.037     Low Low
cufflinks 0.083     Low Low
cufflinks 1.175        
cufflinks 0.905        
cufflinks 1.271        
cufflinks 0.496        
cufflinks 0.228        
cufflinks 1.941       High
cufflinks 0.213        
cufflinks 0.17        
cufflinks 0.581        
cufflinks 1.453       High
cufflinks 0.341        
cufflinks 0.126     Low  
cufflinks 0.632        
cufflinks 0.065     Low Low
cufflinks 0.176        
cufflinks 0.024     Low Low
cufflinks 0.674        
cufflinks 0.335        
cufflinks 1.325       High
cufflinks 0.268        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain