Gene : Potri.002G041400 P. trichocarpa v3.0
Defline:  (1 of 2) 1.14.99.29 - Deoxyhypusine monooxygenase / DOHH Genomic Order:  414
Name:  ? Potri.002G041400 Secondary Identifier:  ? PAC:27023700
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5905 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G041400 0.5kb upstream 0.5kb upstream 3682 true Chr02: 2648524-2652205 Populus trichocarpa
Potri.002G041400 0.5kb upstream 0.5kb upstream 500 false Chr02: 2651706-2652205 Populus trichocarpa
Potri.002G041400 0.5kb downstream 0.5kb downstream 3682 true Chr02: 2648024-2651705 Populus trichocarpa
Potri.002G041400 0.5kb downstream 0.5kb downstream 500 false Chr02: 2648024-2648523 Populus trichocarpa
Potri.002G041400 1.0kb upstream 1.0kb upstream 4182 true Chr02: 2648524-2652705 Populus trichocarpa
Potri.002G041400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2651706-2652705 Populus trichocarpa
Potri.002G041400 1.0kb downstream 1.0kb downstream 4182 true Chr02: 2647524-2651705 Populus trichocarpa
Potri.002G041400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2647524-2648523 Populus trichocarpa
Potri.002G041400 2.0kb upstream 2.0kb upstream 5182 true Chr02: 2648524-2653705 Populus trichocarpa
Potri.002G041400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2651706-2653705 Populus trichocarpa
Potri.002G041400 2.0kb downstream 2.0kb downstream 5182 true Chr02: 2646524-2651705 Populus trichocarpa
Potri.002G041400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2646524-2648523 Populus trichocarpa
Potri.002G041400 5.0kb upstream 5.0kb upstream 8182 true Chr02: 2648524-2656705 Populus trichocarpa
Potri.002G041400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2651706-2656705 Populus trichocarpa
Potri.002G041400 5.0kb downstream 5.0kb downstream 8182 true Chr02: 2643524-2651705 Populus trichocarpa
Potri.002G041400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2643524-2648523 Populus trichocarpa
Potri.002G041400 10.0kb upstream 10.0kb upstream 13182 true Chr02: 2648524-2661705 Populus trichocarpa
Potri.002G041400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2651706-2661705 Populus trichocarpa
Potri.002G041400 10.0kb downstream 10.0kb downstream 13182 true Chr02: 2638524-2651705 Populus trichocarpa
Potri.002G041400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2638524-2648523 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.403        
cufflinks 3.528       Low
cufflinks 4.624        
cufflinks 4.662        
cufflinks 5.434        
cufflinks 6.435        
cufflinks 14.47     High High
cufflinks 4.712        
cufflinks 3.456       Low
cufflinks 5.018        
cufflinks 5.014        
cufflinks 6.84        
cufflinks 5.845        
cufflinks 4.257        
cufflinks 3.232       Low
cufflinks 6.486        
cufflinks 5.787        
cufflinks 5.063        
cufflinks 3.26       Low
cufflinks 6.811        
cufflinks 5.996        
cufflinks 4.037        
cufflinks 5.822        
cufflinks 4.73        
cufflinks 30.502     High  
cufflinks 33.737     High  
cufflinks 32.357     High  
cufflinks 35.318     High  
cufflinks 24.487        
cufflinks 33.735     High  

0 Strain