Gene : Potri.002G261900 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR11241:SF0 - BCDNA.LD08534 Genomic Order:  2619
Name:  ? Potri.002G261900 Secondary Identifier:  ? PAC:27024073
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7206 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6545 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7211 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7184 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G261900 0.5kb upstream 0.5kb upstream 1673 true Chr02: 24981648-24983320 Populus trichocarpa
Potri.002G261900 0.5kb upstream 0.5kb upstream 500 false Chr02: 24982821-24983320 Populus trichocarpa
Potri.002G261900 0.5kb downstream 0.5kb downstream 1673 true Chr02: 24981148-24982820 Populus trichocarpa
Potri.002G261900 0.5kb downstream 0.5kb downstream 500 false Chr02: 24981148-24981647 Populus trichocarpa
Potri.002G261900 1.0kb upstream 1.0kb upstream 2173 true Chr02: 24981648-24983820 Populus trichocarpa
Potri.002G261900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24982821-24983820 Populus trichocarpa
Potri.002G261900 1.0kb downstream 1.0kb downstream 2173 true Chr02: 24980648-24982820 Populus trichocarpa
Potri.002G261900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24980648-24981647 Populus trichocarpa
Potri.002G261900 2.0kb upstream 2.0kb upstream 3173 true Chr02: 24981648-24984820 Populus trichocarpa
Potri.002G261900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24982821-24984820 Populus trichocarpa
Potri.002G261900 2.0kb downstream 2.0kb downstream 3173 true Chr02: 24979648-24982820 Populus trichocarpa
Potri.002G261900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24979648-24981647 Populus trichocarpa
Potri.002G261900 5.0kb upstream 5.0kb upstream 6173 true Chr02: 24981648-24987820 Populus trichocarpa
Potri.002G261900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24982821-24987820 Populus trichocarpa
Potri.002G261900 5.0kb downstream 5.0kb downstream 6173 true Chr02: 24976648-24982820 Populus trichocarpa
Potri.002G261900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24976648-24981647 Populus trichocarpa
Potri.002G261900 10.0kb upstream 10.0kb upstream 11173 true Chr02: 24981648-24992820 Populus trichocarpa
Potri.002G261900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24982821-24992820 Populus trichocarpa
Potri.002G261900 10.0kb downstream 10.0kb downstream 11173 true Chr02: 24971648-24982820 Populus trichocarpa
Potri.002G261900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24971648-24981647 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.051       Low
cufflinks 27.656     High  
cufflinks 15.136     High  
cufflinks 35.133     High  
cufflinks 24.405     High  
cufflinks 2.512       Low
cufflinks 15.43     High  
cufflinks 23.045     High  
cufflinks 15.817     High  
cufflinks 6.991       Low
cufflinks 64.798     High High
cufflinks 26.541     High  
cufflinks 44.056     High  
cufflinks 20.737     High  
cufflinks 16.49     High  
cufflinks 7.251       Low
cufflinks 18.141     High  
cufflinks 110.66     High High
cufflinks 30.977     High  
cufflinks 78.401     High High
cufflinks 10.898     High  
cufflinks 34.418     High  
cufflinks 64.029     High High
cufflinks 10.769     High  
cufflinks 2.721        
cufflinks 2.216        
cufflinks 3.213        
cufflinks 4.187        
cufflinks 22.828       High
cufflinks 1.815        

0 Strain