Gene : Potri.002G184200 P. trichocarpa v3.0
Defline:  (1 of 3) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  1842
Name:  ? Potri.002G184200 Secondary Identifier:  ? PAC:27023394
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G184200 0.5kb upstream 0.5kb upstream 4563 true Chr02: 14385550-14390112 Populus trichocarpa
Potri.002G184200 0.5kb upstream 0.5kb upstream 500 false Chr02: 14385550-14386049 Populus trichocarpa
Potri.002G184200 0.5kb downstream 0.5kb downstream 4563 true Chr02: 14386050-14390612 Populus trichocarpa
Potri.002G184200 0.5kb downstream 0.5kb downstream 500 false Chr02: 14390113-14390612 Populus trichocarpa
Potri.002G184200 1.0kb upstream 1.0kb upstream 5063 true Chr02: 14385050-14390112 Populus trichocarpa
Potri.002G184200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14385050-14386049 Populus trichocarpa
Potri.002G184200 1.0kb downstream 1.0kb downstream 5063 true Chr02: 14386050-14391112 Populus trichocarpa
Potri.002G184200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14390113-14391112 Populus trichocarpa
Potri.002G184200 2.0kb upstream 2.0kb upstream 6063 true Chr02: 14384050-14390112 Populus trichocarpa
Potri.002G184200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14384050-14386049 Populus trichocarpa
Potri.002G184200 2.0kb downstream 2.0kb downstream 6063 true Chr02: 14386050-14392112 Populus trichocarpa
Potri.002G184200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14390113-14392112 Populus trichocarpa
Potri.002G184200 5.0kb upstream 5.0kb upstream 9063 true Chr02: 14381050-14390112 Populus trichocarpa
Potri.002G184200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14381050-14386049 Populus trichocarpa
Potri.002G184200 5.0kb downstream 5.0kb downstream 9063 true Chr02: 14386050-14395112 Populus trichocarpa
Potri.002G184200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14390113-14395112 Populus trichocarpa
Potri.002G184200 10.0kb upstream 10.0kb upstream 14063 true Chr02: 14376050-14390112 Populus trichocarpa
Potri.002G184200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14376050-14386049 Populus trichocarpa
Potri.002G184200 10.0kb downstream 10.0kb downstream 14063 true Chr02: 14386050-14400112 Populus trichocarpa
Potri.002G184200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14390113-14400112 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.991     High  
cufflinks 20.965     High  
cufflinks 13.328     High  
cufflinks 13.821     High  
cufflinks 17.074     High  
cufflinks 57.252     High High
cufflinks 10.131     High Low
cufflinks 71.944     High High
cufflinks 18.959     High  
cufflinks 15.986     High  
cufflinks 13.493     High  
cufflinks 31.369     High  
cufflinks 69.958     High High
cufflinks 15.957     High  
cufflinks 27.646     High  
cufflinks 9.53     High Low
cufflinks 18.492     High  
cufflinks 14.314     High  
cufflinks 20.205     High  
cufflinks 12.418     High  
cufflinks 14.979     High  
cufflinks 36.399     High High
cufflinks 14.007     High  
cufflinks 15.656     High  
cufflinks 133.175     High  
cufflinks 83.374     High  
cufflinks 56.607     High Low
cufflinks 96.374     High  
cufflinks 87.781     High  
cufflinks 116.659     High  

0 Strain