Gene : Potri.002G136700 P. trichocarpa v3.0
Defline:  (1 of 4) 3.1.3.16//3.1.3.27//3.1.3.48 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Phosphatidylglycerophosphatase // Protein-tyrosine-phosphatase / PTPase Genomic Order:  1367
Name:  ? Potri.002G136700 Secondary Identifier:  ? PAC:27020091
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5269 Populus trichocarpa pathologic  
Ptrichocarpa PWY4FS-7 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G136700 0.5kb upstream 0.5kb upstream 3490 true Chr02: 10148487-10151976 Populus trichocarpa
Potri.002G136700 0.5kb upstream 0.5kb upstream 500 false Chr02: 10148487-10148986 Populus trichocarpa
Potri.002G136700 0.5kb downstream 0.5kb downstream 3490 true Chr02: 10148987-10152476 Populus trichocarpa
Potri.002G136700 0.5kb downstream 0.5kb downstream 500 false Chr02: 10151977-10152476 Populus trichocarpa
Potri.002G136700 1.0kb upstream 1.0kb upstream 3990 true Chr02: 10147987-10151976 Populus trichocarpa
Potri.002G136700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10147987-10148986 Populus trichocarpa
Potri.002G136700 1.0kb downstream 1.0kb downstream 3990 true Chr02: 10148987-10152976 Populus trichocarpa
Potri.002G136700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10151977-10152976 Populus trichocarpa
Potri.002G136700 2.0kb upstream 2.0kb upstream 4990 true Chr02: 10146987-10151976 Populus trichocarpa
Potri.002G136700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10146987-10148986 Populus trichocarpa
Potri.002G136700 2.0kb downstream 2.0kb downstream 4990 true Chr02: 10148987-10153976 Populus trichocarpa
Potri.002G136700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10151977-10153976 Populus trichocarpa
Potri.002G136700 5.0kb upstream 5.0kb upstream 7990 true Chr02: 10143987-10151976 Populus trichocarpa
Potri.002G136700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10143987-10148986 Populus trichocarpa
Potri.002G136700 5.0kb downstream 5.0kb downstream 7990 true Chr02: 10148987-10156976 Populus trichocarpa
Potri.002G136700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10151977-10156976 Populus trichocarpa
Potri.002G136700 10.0kb upstream 10.0kb upstream 12990 true Chr02: 10138987-10151976 Populus trichocarpa
Potri.002G136700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10138987-10148986 Populus trichocarpa
Potri.002G136700 10.0kb downstream 10.0kb downstream 12990 true Chr02: 10148987-10161976 Populus trichocarpa
Potri.002G136700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10151977-10161976 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.965       Low
cufflinks 5.77        
cufflinks 12.122     High  
cufflinks 5.698        
cufflinks 11.405     High  
cufflinks 4.204       Low
cufflinks 4.538       Low
cufflinks 7.734        
cufflinks 13.184     High  
cufflinks 8.322        
cufflinks 15.787     High High
cufflinks 3.442       Low
cufflinks 10.03     High  
cufflinks 11.575     High  
cufflinks 12.391     High  
cufflinks 8.154        
cufflinks 14.414     High High
cufflinks 6.795        
cufflinks 4.318       Low
cufflinks 13.118     High  
cufflinks 8.418     High  
cufflinks 11.707     High  
cufflinks 14.052     High High
cufflinks 9.329     High  
cufflinks 12.353        
cufflinks 13.995        
cufflinks 13.977        
cufflinks 18.011       High
cufflinks 11.574        
cufflinks 12.798        

0 Strain