Gene : Potri.002G082300 P. trichocarpa v3.0
Defline:  (1 of 1) 4.2.1.24 - Porphobilinogen synthase / Delta-aminolevulinic acid dehydratase Genomic Order:  823
Name:  ? Potri.002G082300 Secondary Identifier:  ? PAC:27024755
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5918 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5188 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G082300 0.5kb upstream 0.5kb upstream 5572 true Chr02: 5766048-5771619 Populus trichocarpa
Potri.002G082300 0.5kb upstream 0.5kb upstream 500 false Chr02: 5766048-5766547 Populus trichocarpa
Potri.002G082300 0.5kb downstream 0.5kb downstream 5572 true Chr02: 5766548-5772119 Populus trichocarpa
Potri.002G082300 0.5kb downstream 0.5kb downstream 500 false Chr02: 5771620-5772119 Populus trichocarpa
Potri.002G082300 1.0kb upstream 1.0kb upstream 6072 true Chr02: 5765548-5771619 Populus trichocarpa
Potri.002G082300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5765548-5766547 Populus trichocarpa
Potri.002G082300 1.0kb downstream 1.0kb downstream 6072 true Chr02: 5766548-5772619 Populus trichocarpa
Potri.002G082300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5771620-5772619 Populus trichocarpa
Potri.002G082300 2.0kb upstream 2.0kb upstream 7072 true Chr02: 5764548-5771619 Populus trichocarpa
Potri.002G082300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5764548-5766547 Populus trichocarpa
Potri.002G082300 2.0kb downstream 2.0kb downstream 7072 true Chr02: 5766548-5773619 Populus trichocarpa
Potri.002G082300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5771620-5773619 Populus trichocarpa
Potri.002G082300 5.0kb upstream 5.0kb upstream 10072 true Chr02: 5761548-5771619 Populus trichocarpa
Potri.002G082300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5761548-5766547 Populus trichocarpa
Potri.002G082300 5.0kb downstream 5.0kb downstream 10072 true Chr02: 5766548-5776619 Populus trichocarpa
Potri.002G082300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5771620-5776619 Populus trichocarpa
Potri.002G082300 10.0kb upstream 10.0kb upstream 15072 true Chr02: 5756548-5771619 Populus trichocarpa
Potri.002G082300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5756548-5766547 Populus trichocarpa
Potri.002G082300 10.0kb downstream 10.0kb downstream 15072 true Chr02: 5766548-5781619 Populus trichocarpa
Potri.002G082300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5771620-5781619 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.57     High High
cufflinks 17.356     High High
cufflinks 5.147       Low
cufflinks 6.07        
cufflinks 8.06        
cufflinks 10.487     High  
cufflinks 5.26       Low
cufflinks 7.389        
cufflinks 4.962       Low
cufflinks 20.635     High High
cufflinks 5.47        
cufflinks 19.209     High High
cufflinks 6.473        
cufflinks 5.07       Low
cufflinks 7.934        
cufflinks 15.34     High  
cufflinks 8.478        
cufflinks 3.519       Low
cufflinks 15.086     High  
cufflinks 19.468     High High
cufflinks 7.865        
cufflinks 8.653        
cufflinks 16.804     High High
cufflinks 8.471        
cufflinks 17.55       Low
cufflinks 25.738        
cufflinks 30.865     High High
cufflinks 22.831        
cufflinks 23.334        
cufflinks 21.351        

0 Strain