Gene : Potri.002G205800 P. trichocarpa v3.0
Defline:  (1 of 2) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80) Genomic Order:  2058
Name:  ? Potri.002G205800 Secondary Identifier:  ? PAC:27023350
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6908 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G205800 0.5kb upstream 0.5kb upstream 3724 true Chr02: 16893853-16897576 Populus trichocarpa
Potri.002G205800 0.5kb upstream 0.5kb upstream 500 false Chr02: 16893853-16894352 Populus trichocarpa
Potri.002G205800 0.5kb downstream 0.5kb downstream 3724 true Chr02: 16894353-16898076 Populus trichocarpa
Potri.002G205800 0.5kb downstream 0.5kb downstream 500 false Chr02: 16897577-16898076 Populus trichocarpa
Potri.002G205800 1.0kb upstream 1.0kb upstream 4224 true Chr02: 16893353-16897576 Populus trichocarpa
Potri.002G205800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 16893353-16894352 Populus trichocarpa
Potri.002G205800 1.0kb downstream 1.0kb downstream 4224 true Chr02: 16894353-16898576 Populus trichocarpa
Potri.002G205800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 16897577-16898576 Populus trichocarpa
Potri.002G205800 2.0kb upstream 2.0kb upstream 5224 true Chr02: 16892353-16897576 Populus trichocarpa
Potri.002G205800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 16892353-16894352 Populus trichocarpa
Potri.002G205800 2.0kb downstream 2.0kb downstream 5224 true Chr02: 16894353-16899576 Populus trichocarpa
Potri.002G205800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 16897577-16899576 Populus trichocarpa
Potri.002G205800 5.0kb upstream 5.0kb upstream 8224 true Chr02: 16889353-16897576 Populus trichocarpa
Potri.002G205800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 16889353-16894352 Populus trichocarpa
Potri.002G205800 5.0kb downstream 5.0kb downstream 8224 true Chr02: 16894353-16902576 Populus trichocarpa
Potri.002G205800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 16897577-16902576 Populus trichocarpa
Potri.002G205800 10.0kb upstream 10.0kb upstream 13224 true Chr02: 16884353-16897576 Populus trichocarpa
Potri.002G205800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 16884353-16894352 Populus trichocarpa
Potri.002G205800 10.0kb downstream 10.0kb downstream 13224 true Chr02: 16894353-16907576 Populus trichocarpa
Potri.002G205800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 16897577-16907576 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.182        
cufflinks 2.021        
cufflinks 2.681        
cufflinks 1.326       Low
cufflinks 4.278       High
cufflinks 2.264        
cufflinks 1.68        
cufflinks 1.386        
cufflinks 2.335        
cufflinks 1.75        
cufflinks 3.0       High
cufflinks 1.694        
cufflinks 1.801        
cufflinks 1.651        
cufflinks 2.904       High
cufflinks 2.751       High
cufflinks 1.564        
cufflinks 0.936       Low
cufflinks 2.713       High
cufflinks 1.254       Low
cufflinks 1.526        
cufflinks 2.002        
cufflinks 2.203        
cufflinks 1.791        
cufflinks 1.354       Low
cufflinks 2.12        
cufflinks 1.25        
cufflinks 1.899        
cufflinks 4.425       High
cufflinks 4.559       High

0 Strain