Gene : Potri.002G210700 P. trichocarpa v3.0
Defline:  (1 of 1) PF04827 - Plant transposon protein (Plant_tran) Genomic Order:  2107
Name:  ? Potri.002G210700 Secondary Identifier:  ? PAC:27022433
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G210700 0.5kb upstream 0.5kb upstream 2723 true Chr02: 18233261-18235983 Populus trichocarpa
Potri.002G210700 0.5kb upstream 0.5kb upstream 500 false Chr02: 18233261-18233760 Populus trichocarpa
Potri.002G210700 0.5kb downstream 0.5kb downstream 2723 true Chr02: 18233761-18236483 Populus trichocarpa
Potri.002G210700 0.5kb downstream 0.5kb downstream 500 false Chr02: 18235984-18236483 Populus trichocarpa
Potri.002G210700 1.0kb upstream 1.0kb upstream 3223 true Chr02: 18232761-18235983 Populus trichocarpa
Potri.002G210700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 18232761-18233760 Populus trichocarpa
Potri.002G210700 1.0kb downstream 1.0kb downstream 3223 true Chr02: 18233761-18236983 Populus trichocarpa
Potri.002G210700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 18235984-18236983 Populus trichocarpa
Potri.002G210700 2.0kb upstream 2.0kb upstream 4223 true Chr02: 18231761-18235983 Populus trichocarpa
Potri.002G210700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 18231761-18233760 Populus trichocarpa
Potri.002G210700 2.0kb downstream 2.0kb downstream 4223 true Chr02: 18233761-18237983 Populus trichocarpa
Potri.002G210700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 18235984-18237983 Populus trichocarpa
Potri.002G210700 5.0kb upstream 5.0kb upstream 7223 true Chr02: 18228761-18235983 Populus trichocarpa
Potri.002G210700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 18228761-18233760 Populus trichocarpa
Potri.002G210700 5.0kb downstream 5.0kb downstream 7223 true Chr02: 18233761-18240983 Populus trichocarpa
Potri.002G210700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 18235984-18240983 Populus trichocarpa
Potri.002G210700 10.0kb upstream 10.0kb upstream 12223 true Chr02: 18223761-18235983 Populus trichocarpa
Potri.002G210700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 18223761-18233760 Populus trichocarpa
Potri.002G210700 10.0kb downstream 10.0kb downstream 12223 true Chr02: 18233761-18245983 Populus trichocarpa
Potri.002G210700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 18235984-18245983 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 0.006     Low  
cufflinks 0.008     Low  
cufflinks 0.117     Low  
cufflinks 0.052     Low  
cufflinks 0.005     Low Low
cufflinks 0.004     Low Low
cufflinks 0.439       High
cufflinks 0.003     Low Low
cufflinks 0.113     Low  
cufflinks 0.541       High
cufflinks 0.259       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.017     Low  
cufflinks 0.052     Low  
cufflinks 0.014     Low  
cufflinks 0.024     Low  
cufflinks 0.069     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain