Gene : Potri.002G041300 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR10459//PTHR10459:SF60 - DNA LIGASE // POLY [ADP-RIBOSE] POLYMERASE 1 Genomic Order:  413
Name:  ? Potri.002G041300 Secondary Identifier:  ? PAC:27023568
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G041300 0.5kb upstream 0.5kb upstream 9320 true Chr02: 2634398-2643717 Populus trichocarpa
Potri.002G041300 0.5kb upstream 0.5kb upstream 500 false Chr02: 2643218-2643717 Populus trichocarpa
Potri.002G041300 0.5kb downstream 0.5kb downstream 9320 true Chr02: 2633898-2643217 Populus trichocarpa
Potri.002G041300 0.5kb downstream 0.5kb downstream 500 false Chr02: 2633898-2634397 Populus trichocarpa
Potri.002G041300 1.0kb upstream 1.0kb upstream 9820 true Chr02: 2634398-2644217 Populus trichocarpa
Potri.002G041300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2643218-2644217 Populus trichocarpa
Potri.002G041300 1.0kb downstream 1.0kb downstream 9820 true Chr02: 2633398-2643217 Populus trichocarpa
Potri.002G041300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2633398-2634397 Populus trichocarpa
Potri.002G041300 2.0kb upstream 2.0kb upstream 10820 true Chr02: 2634398-2645217 Populus trichocarpa
Potri.002G041300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2643218-2645217 Populus trichocarpa
Potri.002G041300 2.0kb downstream 2.0kb downstream 10820 true Chr02: 2632398-2643217 Populus trichocarpa
Potri.002G041300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2632398-2634397 Populus trichocarpa
Potri.002G041300 5.0kb upstream 5.0kb upstream 13820 true Chr02: 2634398-2648217 Populus trichocarpa
Potri.002G041300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2643218-2648217 Populus trichocarpa
Potri.002G041300 5.0kb downstream 5.0kb downstream 13820 true Chr02: 2629398-2643217 Populus trichocarpa
Potri.002G041300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2629398-2634397 Populus trichocarpa
Potri.002G041300 10.0kb upstream 10.0kb upstream 18820 true Chr02: 2634398-2653217 Populus trichocarpa
Potri.002G041300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2643218-2653217 Populus trichocarpa
Potri.002G041300 10.0kb downstream 10.0kb downstream 18820 true Chr02: 2624398-2643217 Populus trichocarpa
Potri.002G041300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2624398-2634397 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.55        
cufflinks 1.309        
cufflinks 0.508        
cufflinks 0.515        
cufflinks 0.113     Low Low
cufflinks 1.28        
cufflinks 1.32        
cufflinks 0.856        
cufflinks 0.692        
cufflinks 2.689       High
cufflinks 0.763        
cufflinks 0.482        
cufflinks 0.854        
cufflinks 0.67        
cufflinks 6.684       High
cufflinks 0.589        
cufflinks 3.493       High
cufflinks 1.108        
cufflinks 3.98       High
cufflinks 0.411       Low
cufflinks 0.857        
cufflinks 1.783        
cufflinks 1.354        
cufflinks 1.146        
cufflinks 32.522     High  
cufflinks 29.249     High  
cufflinks 23.808       Low
cufflinks 31.235     High  
cufflinks 26.438        
cufflinks 35.333     High  

0 Strain