Gene : Potri.002G142700 P. trichocarpa v3.0
Defline:  (1 of 2) K09493 - T-complex protein 1 subunit alpha (CCT1, TCP1) Genomic Order:  1427
Name:  ? Potri.002G142700 Secondary Identifier:  ? PAC:27021135
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G142700 0.5kb upstream 0.5kb upstream 7123 true Chr02: 10585589-10592711 Populus trichocarpa
Potri.002G142700 0.5kb upstream 0.5kb upstream 500 false Chr02: 10585589-10586088 Populus trichocarpa
Potri.002G142700 0.5kb downstream 0.5kb downstream 7123 true Chr02: 10586089-10593211 Populus trichocarpa
Potri.002G142700 0.5kb downstream 0.5kb downstream 500 false Chr02: 10592712-10593211 Populus trichocarpa
Potri.002G142700 1.0kb upstream 1.0kb upstream 7623 true Chr02: 10585089-10592711 Populus trichocarpa
Potri.002G142700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10585089-10586088 Populus trichocarpa
Potri.002G142700 1.0kb downstream 1.0kb downstream 7623 true Chr02: 10586089-10593711 Populus trichocarpa
Potri.002G142700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10592712-10593711 Populus trichocarpa
Potri.002G142700 2.0kb upstream 2.0kb upstream 8623 true Chr02: 10584089-10592711 Populus trichocarpa
Potri.002G142700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10584089-10586088 Populus trichocarpa
Potri.002G142700 2.0kb downstream 2.0kb downstream 8623 true Chr02: 10586089-10594711 Populus trichocarpa
Potri.002G142700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10592712-10594711 Populus trichocarpa
Potri.002G142700 5.0kb upstream 5.0kb upstream 11623 true Chr02: 10581089-10592711 Populus trichocarpa
Potri.002G142700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10581089-10586088 Populus trichocarpa
Potri.002G142700 5.0kb downstream 5.0kb downstream 11623 true Chr02: 10586089-10597711 Populus trichocarpa
Potri.002G142700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10592712-10597711 Populus trichocarpa
Potri.002G142700 10.0kb upstream 10.0kb upstream 16623 true Chr02: 10576089-10592711 Populus trichocarpa
Potri.002G142700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10576089-10586088 Populus trichocarpa
Potri.002G142700 10.0kb downstream 10.0kb downstream 16623 true Chr02: 10586089-10602711 Populus trichocarpa
Potri.002G142700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10592712-10602711 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.201        
cufflinks 1.215       Low
cufflinks 1.172       Low
cufflinks 1.465       Low
cufflinks 5.133       High
cufflinks 5.137       High
cufflinks 2.449        
cufflinks 5.029       High
cufflinks 3.708        
cufflinks 2.475        
cufflinks 4.134        
cufflinks 2.467        
cufflinks 3.219        
cufflinks 3.643        
cufflinks 4.08        
cufflinks 3.743        
cufflinks 1.646        
cufflinks 2.764        
cufflinks 1.037       Low
cufflinks 3.895        
cufflinks 1.831        
cufflinks 2.907        
cufflinks 1.71        
cufflinks 2.427        
cufflinks 5.959        
cufflinks 6.502        
cufflinks 8.226        
cufflinks 9.542       High
cufflinks 12.186       High
cufflinks 6.342        

0 Strain