Gene : Potri.014G164800 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR21736//PTHR21736:SF20 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN OBERON 1-RELATED Genomic Order:  1648
Name:  ? Potri.014G164800 Secondary Identifier:  ? PAC:27034321
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G164800 0.5kb upstream 0.5kb upstream 5789 true Chr14: 13029954-13035742 Populus trichocarpa
Potri.014G164800 0.5kb upstream 0.5kb upstream 500 false Chr14: 13035243-13035742 Populus trichocarpa
Potri.014G164800 0.5kb downstream 0.5kb downstream 5789 true Chr14: 13029454-13035242 Populus trichocarpa
Potri.014G164800 0.5kb downstream 0.5kb downstream 500 false Chr14: 13029454-13029953 Populus trichocarpa
Potri.014G164800 1.0kb upstream 1.0kb upstream 6289 true Chr14: 13029954-13036242 Populus trichocarpa
Potri.014G164800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 13035243-13036242 Populus trichocarpa
Potri.014G164800 1.0kb downstream 1.0kb downstream 6289 true Chr14: 13028954-13035242 Populus trichocarpa
Potri.014G164800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 13028954-13029953 Populus trichocarpa
Potri.014G164800 2.0kb upstream 2.0kb upstream 7289 true Chr14: 13029954-13037242 Populus trichocarpa
Potri.014G164800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 13035243-13037242 Populus trichocarpa
Potri.014G164800 2.0kb downstream 2.0kb downstream 7289 true Chr14: 13027954-13035242 Populus trichocarpa
Potri.014G164800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 13027954-13029953 Populus trichocarpa
Potri.014G164800 5.0kb upstream 5.0kb upstream 10289 true Chr14: 13029954-13040242 Populus trichocarpa
Potri.014G164800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 13035243-13040242 Populus trichocarpa
Potri.014G164800 5.0kb downstream 5.0kb downstream 10289 true Chr14: 13024954-13035242 Populus trichocarpa
Potri.014G164800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 13024954-13029953 Populus trichocarpa
Potri.014G164800 10.0kb upstream 10.0kb upstream 15289 true Chr14: 13029954-13045242 Populus trichocarpa
Potri.014G164800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 13035243-13045242 Populus trichocarpa
Potri.014G164800 10.0kb downstream 10.0kb downstream 15289 true Chr14: 13019954-13035242 Populus trichocarpa
Potri.014G164800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 13019954-13029953 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.499       Low
cufflinks 4.696       High
cufflinks 2.288        
cufflinks 3.667        
cufflinks 3.934       High
cufflinks 3.669        
cufflinks 2.537        
cufflinks 3.398        
cufflinks 2.601        
cufflinks 2.168        
cufflinks 2.535        
cufflinks 4.509       High
cufflinks 1.991       Low
cufflinks 2.139        
cufflinks 3.204        
cufflinks 3.727        
cufflinks 1.885       Low
cufflinks 4.574       High
cufflinks 1.983       Low
cufflinks 2.238        
cufflinks 2.963        
cufflinks 3.085        
cufflinks 2.044       Low
cufflinks 3.661        
cufflinks 31.108     High  
cufflinks 32.61     High  
cufflinks 34.671     High  
cufflinks 34.345     High  
cufflinks 34.757     High  
cufflinks 32.695     High  

0 Strain