Gene : Potri.002G109700 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Genomic Order:  1097
Name:  ? Potri.002G109700 Secondary Identifier:  ? PAC:27021075
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G109700 0.5kb upstream 0.5kb upstream 1031 true Chr02: 8088559-8089589 Populus trichocarpa
Potri.002G109700 0.5kb upstream 0.5kb upstream 500 false Chr02: 8089090-8089589 Populus trichocarpa
Potri.002G109700 0.5kb downstream 0.5kb downstream 1031 true Chr02: 8088059-8089089 Populus trichocarpa
Potri.002G109700 0.5kb downstream 0.5kb downstream 500 false Chr02: 8088059-8088558 Populus trichocarpa
Potri.002G109700 1.0kb upstream 1.0kb upstream 1531 true Chr02: 8088559-8090089 Populus trichocarpa
Potri.002G109700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 8089090-8090089 Populus trichocarpa
Potri.002G109700 1.0kb downstream 1.0kb downstream 1531 true Chr02: 8087559-8089089 Populus trichocarpa
Potri.002G109700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 8087559-8088558 Populus trichocarpa
Potri.002G109700 2.0kb upstream 2.0kb upstream 2531 true Chr02: 8088559-8091089 Populus trichocarpa
Potri.002G109700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 8089090-8091089 Populus trichocarpa
Potri.002G109700 2.0kb downstream 2.0kb downstream 2531 true Chr02: 8086559-8089089 Populus trichocarpa
Potri.002G109700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 8086559-8088558 Populus trichocarpa
Potri.002G109700 5.0kb upstream 5.0kb upstream 5531 true Chr02: 8088559-8094089 Populus trichocarpa
Potri.002G109700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 8089090-8094089 Populus trichocarpa
Potri.002G109700 5.0kb downstream 5.0kb downstream 5531 true Chr02: 8083559-8089089 Populus trichocarpa
Potri.002G109700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 8083559-8088558 Populus trichocarpa
Potri.002G109700 10.0kb upstream 10.0kb upstream 10531 true Chr02: 8088559-8099089 Populus trichocarpa
Potri.002G109700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 8089090-8099089 Populus trichocarpa
Potri.002G109700 10.0kb downstream 10.0kb downstream 10531 true Chr02: 8078559-8089089 Populus trichocarpa
Potri.002G109700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 8078559-8088558 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.985     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.842       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.219     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.281        
cufflinks 0.156     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.198        
cufflinks 0.601        
cufflinks 9.798       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.096     Low  
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.213     Low  
cufflinks 0.325     Low  
cufflinks 0.211     Low  
cufflinks 0.418        
cufflinks 0.253     Low  

0 Strain