Gene : Potri.002G198500 P. trichocarpa v3.0
Defline:  (1 of 1) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase Genomic Order:  1985
Name:  ? Potri.002G198500 Secondary Identifier:  ? PAC:27023897
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G198500 0.5kb upstream 0.5kb upstream 6388 true Chr02: 15938996-15945383 Populus trichocarpa
Potri.002G198500 0.5kb upstream 0.5kb upstream 500 false Chr02: 15944884-15945383 Populus trichocarpa
Potri.002G198500 0.5kb downstream 0.5kb downstream 6388 true Chr02: 15938496-15944883 Populus trichocarpa
Potri.002G198500 0.5kb downstream 0.5kb downstream 500 false Chr02: 15938496-15938995 Populus trichocarpa
Potri.002G198500 1.0kb upstream 1.0kb upstream 6888 true Chr02: 15938996-15945883 Populus trichocarpa
Potri.002G198500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15944884-15945883 Populus trichocarpa
Potri.002G198500 1.0kb downstream 1.0kb downstream 6888 true Chr02: 15937996-15944883 Populus trichocarpa
Potri.002G198500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15937996-15938995 Populus trichocarpa
Potri.002G198500 2.0kb upstream 2.0kb upstream 7888 true Chr02: 15938996-15946883 Populus trichocarpa
Potri.002G198500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15944884-15946883 Populus trichocarpa
Potri.002G198500 2.0kb downstream 2.0kb downstream 7888 true Chr02: 15936996-15944883 Populus trichocarpa
Potri.002G198500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15936996-15938995 Populus trichocarpa
Potri.002G198500 5.0kb upstream 5.0kb upstream 10888 true Chr02: 15938996-15949883 Populus trichocarpa
Potri.002G198500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15944884-15949883 Populus trichocarpa
Potri.002G198500 5.0kb downstream 5.0kb downstream 10888 true Chr02: 15933996-15944883 Populus trichocarpa
Potri.002G198500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15933996-15938995 Populus trichocarpa
Potri.002G198500 10.0kb upstream 10.0kb upstream 15888 true Chr02: 15938996-15954883 Populus trichocarpa
Potri.002G198500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15944884-15954883 Populus trichocarpa
Potri.002G198500 10.0kb downstream 10.0kb downstream 15888 true Chr02: 15928996-15944883 Populus trichocarpa
Potri.002G198500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15928996-15938995 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.794     High  
cufflinks 11.249     High High
cufflinks 7.567        
cufflinks 7.723        
cufflinks 8.954     High  
cufflinks 9.579     High  
cufflinks 6.069       Low
cufflinks 7.491        
cufflinks 9.125     High  
cufflinks 9.919     High  
cufflinks 6.507       Low
cufflinks 7.396        
cufflinks 8.716        
cufflinks 8.28        
cufflinks 10.633     High High
cufflinks 4.887       Low
cufflinks 6.109       Low
cufflinks 8.489        
cufflinks 10.827     High High
cufflinks 8.562     High  
cufflinks 10.882     High High
cufflinks 7.929        
cufflinks 11.949     High High
cufflinks 9.49     High  
cufflinks 29.764     High Low
cufflinks 40.361     High  
cufflinks 32.005     High  
cufflinks 36.872     High  
cufflinks 46.061     High  
cufflinks 60.694     High High

0 Strain