Gene : Potri.003G119200 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  1192
Name:  ? Potri.003G119200 Secondary Identifier:  ? PAC:26997829
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G119200 0.5kb upstream 0.5kb upstream 3735   true Chr03: 14196727-14200461 Populus trichocarpa
Potri.003G119200 0.5kb upstream 0.5kb upstream 500   false Chr03: 14196727-14197226 Populus trichocarpa
Potri.003G119200 0.5kb downstream 0.5kb downstream 3735   true Chr03: 14197227-14200961 Populus trichocarpa
Potri.003G119200 0.5kb downstream 0.5kb downstream 500   false Chr03: 14200462-14200961 Populus trichocarpa
Potri.003G119200 1.0kb upstream 1.0kb upstream 4235   true Chr03: 14196227-14200461 Populus trichocarpa
Potri.003G119200 1.0kb upstream 1.0kb upstream 1000   false Chr03: 14196227-14197226 Populus trichocarpa
Potri.003G119200 1.0kb downstream 1.0kb downstream 4235   true Chr03: 14197227-14201461 Populus trichocarpa
Potri.003G119200 1.0kb downstream 1.0kb downstream 1000   false Chr03: 14200462-14201461 Populus trichocarpa
Potri.003G119200 2.0kb upstream 2.0kb upstream 5235   true Chr03: 14195227-14200461 Populus trichocarpa
Potri.003G119200 2.0kb upstream 2.0kb upstream 2000   false Chr03: 14195227-14197226 Populus trichocarpa
Potri.003G119200 2.0kb downstream 2.0kb downstream 5235   true Chr03: 14197227-14202461 Populus trichocarpa
Potri.003G119200 2.0kb downstream 2.0kb downstream 2000   false Chr03: 14200462-14202461 Populus trichocarpa
Potri.003G119200 5.0kb upstream 5.0kb upstream 8235   true Chr03: 14192227-14200461 Populus trichocarpa
Potri.003G119200 5.0kb upstream 5.0kb upstream 5000   false Chr03: 14192227-14197226 Populus trichocarpa
Potri.003G119200 5.0kb downstream 5.0kb downstream 8235   true Chr03: 14197227-14205461 Populus trichocarpa
Potri.003G119200 5.0kb downstream 5.0kb downstream 5000   false Chr03: 14200462-14205461 Populus trichocarpa
Potri.003G119200 10.0kb upstream 10.0kb upstream 13235   true Chr03: 14187227-14200461 Populus trichocarpa
Potri.003G119200 10.0kb upstream 10.0kb upstream 10000   false Chr03: 14187227-14197226 Populus trichocarpa
Potri.003G119200 10.0kb downstream 10.0kb downstream 13235   true Chr03: 14197227-14210461 Populus trichocarpa
Potri.003G119200 10.0kb downstream 10.0kb downstream 10000   false Chr03: 14200462-14210461 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.998        
cufflinks 12.124     High High
cufflinks 8.691     High  
cufflinks 2.426        
cufflinks 3.407        
cufflinks 2.946        
cufflinks 0.018     Low Low
cufflinks 2.117        
cufflinks 4.791        
cufflinks 3.846        
cufflinks 0.663        
cufflinks 0.021     Low Low
cufflinks 3.964        
cufflinks 0.011     Low Low
cufflinks 3.547        
cufflinks 0.004     Low Low
cufflinks 0.419        
cufflinks 9.735     High  
cufflinks 1.418        
cufflinks 0.506        
cufflinks 3.27        
cufflinks 1.273        
cufflinks 1.875        
cufflinks 0.915        
cufflinks 58.506     High  
cufflinks 61.161     High  
cufflinks 66.649     High  
cufflinks 57.294     High  
cufflinks 36.777     High  
cufflinks 62.046     High  

0 Strain