Gene : Potri.003G087500 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR12050:SF1 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG Genomic Order:  875
Name:  ? Potri.003G087500 Secondary Identifier:  ? PAC:26997357
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G087500 0.5kb upstream 0.5kb upstream 3256   true Chr03: 11480717-11483972 Populus trichocarpa
Potri.003G087500 0.5kb upstream 0.5kb upstream 500   false Chr03: 11483473-11483972 Populus trichocarpa
Potri.003G087500 0.5kb downstream 0.5kb downstream 3256   true Chr03: 11480217-11483472 Populus trichocarpa
Potri.003G087500 0.5kb downstream 0.5kb downstream 500   false Chr03: 11480217-11480716 Populus trichocarpa
Potri.003G087500 1.0kb upstream 1.0kb upstream 3756   true Chr03: 11480717-11484472 Populus trichocarpa
Potri.003G087500 1.0kb upstream 1.0kb upstream 1000   false Chr03: 11483473-11484472 Populus trichocarpa
Potri.003G087500 1.0kb downstream 1.0kb downstream 3756   true Chr03: 11479717-11483472 Populus trichocarpa
Potri.003G087500 1.0kb downstream 1.0kb downstream 1000   false Chr03: 11479717-11480716 Populus trichocarpa
Potri.003G087500 2.0kb upstream 2.0kb upstream 4756   true Chr03: 11480717-11485472 Populus trichocarpa
Potri.003G087500 2.0kb upstream 2.0kb upstream 2000   false Chr03: 11483473-11485472 Populus trichocarpa
Potri.003G087500 2.0kb downstream 2.0kb downstream 4756   true Chr03: 11478717-11483472 Populus trichocarpa
Potri.003G087500 2.0kb downstream 2.0kb downstream 2000   false Chr03: 11478717-11480716 Populus trichocarpa
Potri.003G087500 5.0kb upstream 5.0kb upstream 7756   true Chr03: 11480717-11488472 Populus trichocarpa
Potri.003G087500 5.0kb upstream 5.0kb upstream 5000   false Chr03: 11483473-11488472 Populus trichocarpa
Potri.003G087500 5.0kb downstream 5.0kb downstream 7756   true Chr03: 11475717-11483472 Populus trichocarpa
Potri.003G087500 5.0kb downstream 5.0kb downstream 5000   false Chr03: 11475717-11480716 Populus trichocarpa
Potri.003G087500 10.0kb upstream 10.0kb upstream 12756   true Chr03: 11480717-11493472 Populus trichocarpa
Potri.003G087500 10.0kb upstream 10.0kb upstream 10000   false Chr03: 11483473-11493472 Populus trichocarpa
Potri.003G087500 10.0kb downstream 10.0kb downstream 12756   true Chr03: 11470717-11483472 Populus trichocarpa
Potri.003G087500 10.0kb downstream 10.0kb downstream 10000   false Chr03: 11470717-11480716 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.636        
cufflinks 1.26       Low
cufflinks 2.945        
cufflinks 3.213        
cufflinks 1.787       Low
cufflinks 2.535        
cufflinks 2.657        
cufflinks 2.5        
cufflinks 3.573       High
cufflinks 2.083        
cufflinks 2.306        
cufflinks 3.32       High
cufflinks 2.735        
cufflinks 2.477        
cufflinks 2.339        
cufflinks 3.621       High
cufflinks 2.108        
cufflinks 3.078        
cufflinks 3.048        
cufflinks 3.735       High
cufflinks 1.725       Low
cufflinks 2.25        
cufflinks 1.986        
cufflinks 1.915        
cufflinks 23.675       High
cufflinks 12.614       Low
cufflinks 14.778        
cufflinks 16.205        
cufflinks 24.867       High
cufflinks 13.911        

0 Strain