Gene : Potri.003G015700 P. trichocarpa v3.0
Defline:  (1 of 2) 2.5.1.3//2.7.1.49//2.7.4.7 - Thiamine-phosphate diphosphorylase / TMP pyrophosphorylase // Hydroxymethylpyrimidine kinase // Phosphomethylpyrimidine kinase / Hydroxymethylpyrimidine phosphokinase Genomic Order:  157
Name:  ? Potri.003G015700 Secondary Identifier:  ? PAC:26997123
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6910 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6890 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6908 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G015700 0.5kb upstream 0.5kb upstream 5868   true Chr03: 1976972-1982839 Populus trichocarpa
Potri.003G015700 0.5kb upstream 0.5kb upstream 500   false Chr03: 1982340-1982839 Populus trichocarpa
Potri.003G015700 0.5kb downstream 0.5kb downstream 5868   true Chr03: 1976472-1982339 Populus trichocarpa
Potri.003G015700 0.5kb downstream 0.5kb downstream 500   false Chr03: 1976472-1976971 Populus trichocarpa
Potri.003G015700 1.0kb upstream 1.0kb upstream 6368   true Chr03: 1976972-1983339 Populus trichocarpa
Potri.003G015700 1.0kb upstream 1.0kb upstream 1000   false Chr03: 1982340-1983339 Populus trichocarpa
Potri.003G015700 1.0kb downstream 1.0kb downstream 6368   true Chr03: 1975972-1982339 Populus trichocarpa
Potri.003G015700 1.0kb downstream 1.0kb downstream 1000   false Chr03: 1975972-1976971 Populus trichocarpa
Potri.003G015700 2.0kb upstream 2.0kb upstream 7368   true Chr03: 1976972-1984339 Populus trichocarpa
Potri.003G015700 2.0kb upstream 2.0kb upstream 2000   false Chr03: 1982340-1984339 Populus trichocarpa
Potri.003G015700 2.0kb downstream 2.0kb downstream 7368   true Chr03: 1974972-1982339 Populus trichocarpa
Potri.003G015700 2.0kb downstream 2.0kb downstream 2000   false Chr03: 1974972-1976971 Populus trichocarpa
Potri.003G015700 5.0kb upstream 5.0kb upstream 10368   true Chr03: 1976972-1987339 Populus trichocarpa
Potri.003G015700 5.0kb upstream 5.0kb upstream 5000   false Chr03: 1982340-1987339 Populus trichocarpa
Potri.003G015700 5.0kb downstream 5.0kb downstream 10368   true Chr03: 1971972-1982339 Populus trichocarpa
Potri.003G015700 5.0kb downstream 5.0kb downstream 5000   false Chr03: 1971972-1976971 Populus trichocarpa
Potri.003G015700 10.0kb upstream 10.0kb upstream 15368   true Chr03: 1976972-1992339 Populus trichocarpa
Potri.003G015700 10.0kb upstream 10.0kb upstream 10000   false Chr03: 1982340-1992339 Populus trichocarpa
Potri.003G015700 10.0kb downstream 10.0kb downstream 15368   true Chr03: 1966972-1982339 Populus trichocarpa
Potri.003G015700 10.0kb downstream 10.0kb downstream 10000   false Chr03: 1966972-1976971 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.361        
cufflinks 0.518        
cufflinks 0.908       High
cufflinks 0.342        
cufflinks 0.461        
cufflinks 0.291       Low
cufflinks 0.497        
cufflinks 0.279       Low
cufflinks 0.339        
cufflinks 0.389        
cufflinks 0.477        
cufflinks 0.485        
cufflinks 0.46        
cufflinks 0.384        
cufflinks 0.373        
cufflinks 0.431        
cufflinks 0.325       Low
cufflinks 0.552        
cufflinks 0.36        
cufflinks 0.551        
cufflinks 0.563        
cufflinks 0.438        
cufflinks 0.473        
cufflinks 0.686       High
cufflinks 1.308        
cufflinks 1.892        
cufflinks 1.823        
cufflinks 3.158       High
cufflinks 2.742       High
cufflinks 1.899        

0 Strain