Gene : Potri.003G027800 P. trichocarpa v3.0
Defline:  (1 of 5) PF04683 - Proteasome complex subunit Rpn13 ubiquitin receptor (Proteasom_Rpn13) Genomic Order:  278
Name:  ? Potri.003G027800 Secondary Identifier:  ? PAC:26996475
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G027800 0.5kb upstream 0.5kb upstream 2783   true Chr03: 3476207-3478989 Populus trichocarpa
Potri.003G027800 0.5kb upstream 0.5kb upstream 500   false Chr03: 3478490-3478989 Populus trichocarpa
Potri.003G027800 0.5kb downstream 0.5kb downstream 2783   true Chr03: 3475707-3478489 Populus trichocarpa
Potri.003G027800 0.5kb downstream 0.5kb downstream 500   false Chr03: 3475707-3476206 Populus trichocarpa
Potri.003G027800 1.0kb upstream 1.0kb upstream 3283   true Chr03: 3476207-3479489 Populus trichocarpa
Potri.003G027800 1.0kb upstream 1.0kb upstream 1000   false Chr03: 3478490-3479489 Populus trichocarpa
Potri.003G027800 1.0kb downstream 1.0kb downstream 3283   true Chr03: 3475207-3478489 Populus trichocarpa
Potri.003G027800 1.0kb downstream 1.0kb downstream 1000   false Chr03: 3475207-3476206 Populus trichocarpa
Potri.003G027800 2.0kb upstream 2.0kb upstream 4283   true Chr03: 3476207-3480489 Populus trichocarpa
Potri.003G027800 2.0kb upstream 2.0kb upstream 2000   false Chr03: 3478490-3480489 Populus trichocarpa
Potri.003G027800 2.0kb downstream 2.0kb downstream 4283   true Chr03: 3474207-3478489 Populus trichocarpa
Potri.003G027800 2.0kb downstream 2.0kb downstream 2000   false Chr03: 3474207-3476206 Populus trichocarpa
Potri.003G027800 5.0kb upstream 5.0kb upstream 7283   true Chr03: 3476207-3483489 Populus trichocarpa
Potri.003G027800 5.0kb upstream 5.0kb upstream 5000   false Chr03: 3478490-3483489 Populus trichocarpa
Potri.003G027800 5.0kb downstream 5.0kb downstream 7283   true Chr03: 3471207-3478489 Populus trichocarpa
Potri.003G027800 5.0kb downstream 5.0kb downstream 5000   false Chr03: 3471207-3476206 Populus trichocarpa
Potri.003G027800 10.0kb upstream 10.0kb upstream 12283   true Chr03: 3476207-3488489 Populus trichocarpa
Potri.003G027800 10.0kb upstream 10.0kb upstream 10000   false Chr03: 3478490-3488489 Populus trichocarpa
Potri.003G027800 10.0kb downstream 10.0kb downstream 12283   true Chr03: 3466207-3478489 Populus trichocarpa
Potri.003G027800 10.0kb downstream 10.0kb downstream 10000   false Chr03: 3466207-3476206 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.058     Low  
cufflinks 0.105     Low  
cufflinks 0.064     Low  
cufflinks 0.161        
cufflinks 0.024     Low Low
cufflinks 0.14     Low  
cufflinks 0.067     Low  
cufflinks 0.006     Low Low
cufflinks 0.237       High
cufflinks 0.199        
cufflinks 0.007     Low Low
cufflinks 0.102     Low  
cufflinks 0.04     Low  
cufflinks 0.141     Low  
cufflinks 0.037     Low  
cufflinks 0.261       High
cufflinks 0.368       High
cufflinks 0.042     Low  
cufflinks 0.14        
cufflinks 0.101     Low  
cufflinks 0.033     Low  
cufflinks 0.087     Low  
cufflinks 0.102     Low  
cufflinks 0.045     Low  
cufflinks 0.041     Low  
cufflinks 0.045     Low  
cufflinks 0.05     Low  
cufflinks 0.027     Low Low

0 Strain