Gene : Potri.002G260700 P. trichocarpa v3.0
Defline:  (1 of 1) 4.1.3.44 - tRNA 4-demethylwyosine synthase (AdoMet-dependent) Genomic Order:  2607
Name:  ? Potri.002G260700 Secondary Identifier:  ? PAC:27020498
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7283 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7286 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G260700 0.5kb upstream 0.5kb upstream 4610 true Chr02: 24928801-24933410 Populus trichocarpa
Potri.002G260700 0.5kb upstream 0.5kb upstream 500 false Chr02: 24928801-24929300 Populus trichocarpa
Potri.002G260700 0.5kb downstream 0.5kb downstream 4610 true Chr02: 24929301-24933910 Populus trichocarpa
Potri.002G260700 0.5kb downstream 0.5kb downstream 500 false Chr02: 24933411-24933910 Populus trichocarpa
Potri.002G260700 1.0kb upstream 1.0kb upstream 5110 true Chr02: 24928301-24933410 Populus trichocarpa
Potri.002G260700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24928301-24929300 Populus trichocarpa
Potri.002G260700 1.0kb downstream 1.0kb downstream 5110 true Chr02: 24929301-24934410 Populus trichocarpa
Potri.002G260700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24933411-24934410 Populus trichocarpa
Potri.002G260700 2.0kb upstream 2.0kb upstream 6110 true Chr02: 24927301-24933410 Populus trichocarpa
Potri.002G260700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24927301-24929300 Populus trichocarpa
Potri.002G260700 2.0kb downstream 2.0kb downstream 6110 true Chr02: 24929301-24935410 Populus trichocarpa
Potri.002G260700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24933411-24935410 Populus trichocarpa
Potri.002G260700 5.0kb upstream 5.0kb upstream 9110 true Chr02: 24924301-24933410 Populus trichocarpa
Potri.002G260700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24924301-24929300 Populus trichocarpa
Potri.002G260700 5.0kb downstream 5.0kb downstream 9110 true Chr02: 24929301-24938410 Populus trichocarpa
Potri.002G260700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24933411-24938410 Populus trichocarpa
Potri.002G260700 10.0kb upstream 10.0kb upstream 14110 true Chr02: 24919301-24933410 Populus trichocarpa
Potri.002G260700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24919301-24929300 Populus trichocarpa
Potri.002G260700 10.0kb downstream 10.0kb downstream 14110 true Chr02: 24929301-24943410 Populus trichocarpa
Potri.002G260700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24933411-24943410 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.904       Low
cufflinks 6.041        
cufflinks 3.911        
cufflinks 3.678        
cufflinks 14.173     High High
cufflinks 3.606        
cufflinks 6.009        
cufflinks 7.104       High
cufflinks 3.338        
cufflinks 4.263        
cufflinks 2.667       Low
cufflinks 3.067       Low
cufflinks 6.444        
cufflinks 4.049        
cufflinks 6.288        
cufflinks 2.142       Low
cufflinks 3.972        
cufflinks 4.596        
cufflinks 7.639       High
cufflinks 4.211        
cufflinks 4.149        
cufflinks 7.434       High
cufflinks 4.256        
cufflinks 5.423        
cufflinks 28.224        
cufflinks 28.469     High  
cufflinks 26.859     High  
cufflinks 27.412        
cufflinks 26.895        
cufflinks 27.627     High  

0 Strain